Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01003218.1 Kokia drynarioides strain JFW-HI SEQ_115845, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  92573

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
68--261
23
8.3
23
81
5
203
13
20
20
45
1.85
69--263
94
2.1
94
86
3
279
13
20
20
46
1.84
88--286
94
2.1
94
84
3
249
13
21
20
44
1.86
3455--3514
22
2.8
22
79
2
59
71
10
6
11
1.30
6862--6918
30
1.9
30
85
7
80
50
1
0
47
1.11
7343--7368
7
3.7
7
100
0
52
88
0
11
0
0.52
8703--8750
17
2.8
17
87
9
71
45
2
2
50
1.25
8716--8764
24
2.1
24
85
11
66
46
2
2
48
1.25
10492--10811
29
10.9
29
76
9
285
33
29
3
33
1.75
10492--10824
59
5.7
59
83
5
381
33
29
3
32
1.76
13019--13075
30
1.9
29
86
10
80
43
5
0
50
1.24
16001--16069
21
3.5
21
69
23
60
57
2
0
39
1.13
16046--16107
10
6.7
10
74
18
55
64
0
0
35
0.94
16046--16107
19
3.4
19
76
15
76
64
0
0
35
0.94
16006--16107
36
2.7
37
82
10
102
60
1
0
37
1.08
16047--16125
36
2.2
35
84
10
99
64
1
0
34
1.02
28957--28982
12
2.2
12
100
0
52
23
15
0
61
1.33
35855--35917
29
2.1
31
91
5
103
47
1
6
44
1.38
41433--41537
52
2.0
52
83
7
133
49
6
3
40
1.47
41744--41781
7
5.4
7
90
0
58
34
0
42
23
1.55
42179--42242
35
1.9
33
87
6
85
71
1
1
25
1.03
47609--47657
18
2.8
17
76
11
55
73
2
6
18
1.14
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50825--50849
3
8.3
3
100
0
50
68
0
0
32
0.90
50848--50884
3
13.3
3
83
16
53
27
0
0
72
0.84
50848--50886
5
7.2
5
97
2
51
25
0
0
74
0.82
52498--52535
16
2.3
17
86
13
53
73
0
5
21
1.02
53506--53548
18
2.4
18
80
7
52
53
2
0
44
1.13
59299--59386
23
3.8
23
82
7
99
27
11
20
40
1.86
59594--59729
69
2.0
69
85
1
184
28
8
6
56
1.53
64463--64523
17
3.4
17
68
12
50
32
11
21
34
1.89
66365--66418
25
2.3
23
84
9
65
29
1
11
57
1.44
71398--71439
13
2.9
14
80
13
50
54
0
0
45
0.99
71402--71438
16
2.3
16
86
13
58
59
0
0
40
0.97
80547--80616
35
2.0
35
94
0
122
38
10
27
24
1.87
85640--85676
17
2.2
17
90
4
58
70
0
0
29
0.88
86632--86686
27
2.1
26
83
10
67
54
3
3
38
1.36
90615--90660
23
2.0
23
82
0
56
23
4
2
69
1.17

Tables:   1

The End!