Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01003322.1 Kokia drynarioides strain JFW-HI SEQ_116017, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  77459

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
353--435
4
20.2
4
78
14
89
1
31
0
67
0.98
386--435
17
2.9
17
100
0
100
0
30
0
70
0.88
2170--2223
17
2.9
18
83
8
65
68
3
3
24
1.22
3596--3630
12
2.9
12
95
0
61
40
51
8
0
1.33
3595--3632
14
2.7
14
95
0
67
42
50
7
0
1.31
13977--14090
58
2.0
58
98
0
219
40
13
17
28
1.87
17481--17518
3
12.7
3
100
0
76
34
31
0
34
1.58
30705--30731
4
6.8
4
100
0
54
25
0
0
74
0.83
36133--36171
21
1.9
20
89
5
60
41
0
5
53
1.23
48747--48785
20
2.0
20
85
10
53
43
7
2
46
1.46
52774--52830
30
1.9
30
85
7
80
40
3
5
50
1.42
53721--53745
5
5.0
5
100
0
50
40
0
20
40
1.52
68662--68687
6
4.3
6
100
0
52
50
0
34
15
1.45
68744--68774
14
2.2
14
94
0
53
51
0
0
48
1.00
69524--70101
130
4.5
131
81
3
591
34
15
10
39
1.82
70554--70708
78
2.0
78
92
2
258
37
16
14
31
1.89
77083--77128
21
2.2
21
84
7
58
50
4
4
41
1.42

Tables:   1

The End!