Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01003329.1 Kokia drynarioides strain JFW-HI SEQ_116030, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  129022

Tables:   1   

This is table  1  of  1  ( 50 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
484--629
3
46.0
3
70
10
94
36
5
2
54
1.38
484--591
22
5.0
22
77
13
107
37
4
1
55
1.31
484--630
64
2.3
64
98
0
285
37
5
2
54
1.38
489--607
22
5.5
22
75
11
102
37
5
3
53
1.39
1289--1317
14
2.0
15
93
6
51
20
6
20
51
1.70
1329--1408
17
4.4
17
77
16
88
55
2
1
41
1.21
1332--1407
39
1.9
39
91
2
125
56
2
1
39
1.21
1329--1408
6
14.0
6
73
12
62
55
2
1
41
1.21
1343--1397
22
2.4
23
81
3
76
54
3
0
41
1.18
4989--5053
27
2.4
27
92
0
103
64
0
9
26
1.23
5460--5502
18
2.4
18
100
0
86
44
23
0
32
1.54
5598--5627
5
6.2
5
92
7
53
40
0
0
60
0.97
5948--6044
31
3.1
31
81
11
83
23
11
12
52
1.71
14389--14445
22
2.6
22
75
10
62
64
10
7
17
1.46
14397--14445
22
2.2
22
85
0
71
67
8
6
18
1.37
21932--22025
30
3.1
30
89
0
143
30
7
36
25
1.84
32483--32521
18
2.2
18
86
9
53
56
2
2
38
1.27
35004--37946
596
4.9
596
91
1
4559
34
12
16
35
1.87
41753--41930
93
1.9
93
89
2
277
26
16
27
29
1.97
55301--55422
58
2.1
58
92
1
210
35
19
12
32
1.89
55748--55782
18
1.9
18
88
11
54
42
8
0
48
1.33
58378--58625
52
4.8
51
78
4
253
32
24
15
27
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58381--58625
105
2.3
105
85
2
314
32
24
15
27
1.95
60799--60841
20
2.1
21
82
4
52
67
2
2
27
1.15
61537--61575
20
2.0
20
90
5
62
48
15
2
33
1.58
70620--70707
45
2.0
45
93
0
149
48
6
9
35
1.61
70620--70729
45
2.4
45
86
7
143
49
8
8
34
1.62
71209--71298
47
1.9
46
84
2
117
51
8
15
24
1.72
71207--71308
47
2.2
46
78
1
114
51
7
13
26
1.68
71862--71904
3
14.3
3
100
0
86
32
0
0
67
0.91
71970--71995
7
3.7
7
100
0
52
84
0
0
15
0.62
72694--72781
23
3.8
23
84
1
113
42
20
13
23
1.88
72873--72919
12
4.0
12
86
2
69
44
14
17
23
1.85
72873--72919
24
2.0
23
91
4
76
44
14
17
23
1.85
74336--74366
7
4.4
7
91
0
53
58
3
0
38
1.15
92010--92051
19
2.2
19
83
8
50
30
2
7
59
1.37
92557--92586
15
1.9
16
93
6
53
36
0
0
63
0.95
95132--95170
19
2.1
19
85
9
53
30
5
5
58
1.41
99670--99709
2
20.0
2
94
0
71
50
2
0
47
1.14
101246--101328
35
2.4
35
87
0
121
40
2
21
34
1.67
120160--120213
24
2.3
24
87
3
74
31
14
14
38
1.87
120213--120286
30
2.5
30
95
0
130
54
16
6
22
1.66
123262--123297
18
1.9
19
88
5
56
69
2
5
22
1.22
123383--123440
20
3.1
19
78
11
57
56
3
10
29
1.49
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
123574--123623
20
2.5
20
80
6
57
46
4
0
50
1.20
123565--123619
20
2.7
19
76
13
56
47
3
1
47
1.30
124388--124430
19
2.2
20
87
4
61
30
2
0
67
1.03
124435--124508
23
3.2
22
73
16
69
45
1
2
50
1.24
128632--128828
61
3.3
59
80
12
222
22
16
17
43
1.88
128572--128828
62
4.3
60
76
16
214
24
17
16
42
1.89

Tables:   1

The End!