Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01003330.1 Kokia drynarioides strain JFW-HI SEQ_116031, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  85743

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10250--10291
22
1.9
22
90
0
66
64
2
0
33
1.07
10558--10600
22
2.0
22
90
4
70
51
0
0
48
1.00
11199--11385
99
1.9
99
92
0
311
39
8
31
21
1.83
11549--11587
11
3.7
11
83
13
55
48
2
0
48
1.15
11537--11587
20
2.6
20
90
3
77
47
1
0
50
1.12
11546--11579
9
3.6
9
85
14
50
47
0
0
52
1.00
13775--13829
28
2.0
28
96
0
101
41
3
3
50
1.37
18928--18958
2
15.5
2
100
0
62
48
0
0
51
1.00
19790--19831
22
2.0
21
90
9
68
33
19
14
33
1.91
20435--20487
23
2.4
23
81
12
58
50
0
0
49
1.00
24565--24642
36
2.2
36
95
0
138
46
19
6
28
1.74
25659--25694
11
3.4
11
88
3
56
44
0
0
55
0.99
26516--26582
6
10.8
6
82
6
62
47
0
52
0
1.00
26518--26577
12
4.8
12
84
8
75
45
0
55
0
0.99
26518--26572
20
2.8
20
86
5
78
43
0
56
0
0.99
26516--26576
26
2.4
25
83
5
79
45
0
54
0
1.00
27100--27449
147
2.4
147
83
9
428
44
11
3
41
1.56
28142--28166
4
6.2
4
100
0
50
24
0
0
76
0.80
56274--56462
94
2.0
94
98
0
369
37
6
20
35
1.79
59316--59361
13
3.4
14
79
11
60
58
2
0
39
1.10
73197--73334
68
2.0
68
100
0
276
23
17
31
27
1.97
74381--74405
5
5.0
5
100
0
50
80
0
20
0
0.72
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
76403--76573
91
1.9
91
87
0
252
34
19
19
26
1.96
78353--78396
15
2.9
15
77
12
54
43
9
6
40
1.63
79412--79639
115
2.0
114
88
2
341
45
7
5
41
1.55
79412--79639
114
2.0
115
88
2
343
45
7
5
41
1.55
80209--80241
17
1.9
17
93
0
57
54
0
3
42
1.15
85570--85613
15
3.0
15
83
9
56
40
2
0
56
1.11
85702--85743
2
21.0
2
100
0
84
50
0
0
50
1.00

Tables:   1

The End!