Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01003370.1 Kokia drynarioides strain JFW-HI SEQ_116097, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  158552

Tables:   1   

This is table  1  of  1  ( 39 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20141--20180
2
20.5
2
94
5
73
47
0
0
52
1.00
21540--22060
61
8.5
60
81
6
566
29
18
13
38
1.89
21537--22060
123
4.3
123
83
3
592
29
18
13
38
1.89
22171--22388
61
3.6
59
79
8
233
35
16
16
31
1.91
22171--22388
60
3.6
59
80
6
240
35
16
16
31
1.91
27207--27262
25
2.1
25
83
12
67
51
3
17
26
1.62
27572--27596
13
1.9
13
100
0
50
72
4
0
24
1.02
31343--31376
2
17.0
2
100
0
68
50
0
0
50
1.00
33989--34017
3
9.7
3
100
0
58
68
0
31
0
0.89
45004--45054
24
2.1
24
92
0
84
19
11
9
58
1.60
46614--46663
24
2.1
24
92
0
82
28
12
6
54
1.60
48226--48257
3
10.7
3
100
0
64
68
0
0
31
0.90
48992--49025
6
5.8
6
93
3
52
0
55
8
35
1.31
48992--49029
12
3.2
12
92
3
60
0
57
7
34
1.28
53499--53543
23
1.9
24
90
4
74
35
4
11
48
1.59
53769--53829
16
3.9
15
75
10
59
52
8
4
34
1.53
56613--56644
2
16.0
2
100
0
64
50
0
0
50
1.00
56779--56847
35
2.0
35
91
0
111
47
11
1
39
1.49
67056--67085
5
6.0
5
92
0
51
83
16
0
0
0.65
67975--68196
122
1.8
123
94
1
392
34
11
21
32
1.89
68998--69058
23
2.7
22
75
9
61
50
0
3
45
1.17
71127--71164
20
1.9
20
88
0
58
50
0
2
47
1.15
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
77979--78152
86
2.0
86
98
0
339
18
28
12
40
1.88
80218--80257
20
2.0
21
85
5
55
20
25
2
52
1.59
82035--82073
14
2.9
14
85
7
55
28
0
5
66
1.12
83366--83407
22
1.9
22
90
0
66
61
9
7
21
1.50
85971--86000
13
2.3
13
94
0
51
43
6
10
40
1.64
94102--94139
19
2.0
20
89
5
60
44
2
2
50
1.30
94478--94594
55
2.2
55
82
3
148
31
17
16
34
1.93
94540--94795
59
4.3
59
77
6
232
28
18
15
37
1.91
94826--94976
59
2.6
58
80
12
159
27
19
15
38
1.91
94828--95052
59
3.9
58
75
15
150
28
18
14
39
1.89
95969--96090
30
4.1
30
84
8
135
63
3
7
26
1.36
97256--97299
20
2.2
20
83
0
52
68
2
6
22
1.25
119352--119400
24
2.0
24
100
0
98
20
8
42
28
1.80
133351--133388
20
1.9
20
88
0
58
36
0
2
60
1.11
136928--137006
29
2.8
29
75
16
83
54
7
0
37
1.29
141319--141350
2
16.0
2
100
0
64
50
0
50
0
1.00
149596--149651
23
2.4
24
79
11
62
19
0
26
53
1.45

Tables:   1

The End!