Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01003389.1 Kokia drynarioides strain JFW-HI SEQ_116126, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  135156

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
141--179
6
6.5
6
87
0
51
46
0
30
23
1.53
3564--3656
29
3.3
29
78
14
115
47
7
12
32
1.70
3575--3624
25
2.0
26
88
4
75
50
12
12
26
1.74
3564--3634
25
2.7
26
76
10
72
50
8
12
28
1.69
21719--21842
61
2.0
61
98
0
239
29
6
11
53
1.61
31483--31525
18
2.5
17
81
7
50
41
6
0
51
1.29
32855--32894
20
2.0
20
85
0
53
37
0
10
52
1.35
47512--47541
2
15.0
2
100
0
60
0
50
0
50
1.00
49389--49430
16
2.6
17
77
11
52
61
0
4
33
1.17
50597--50635
15
2.5
16
83
8
53
35
5
2
56
1.35
78490--78532
24
1.9
21
81
13
50
11
25
9
53
1.67
85988--86073
26
3.2
27
67
26
74
37
17
13
31
1.89
87464--87497
14
2.4
14
90
0
50
23
0
8
67
1.18
87594--87640
24
2.0
22
84
8
58
31
2
6
59
1.34
89544--89619
30
2.6
29
83
8
82
42
15
10
31
1.81
91683--91758
38
2.0
38
94
0
134
42
15
5
36
1.70
92019--92062
21
2.0
21
83
12
54
56
0
2
40
1.11
106012--106045
15
2.2
16
89
5
52
26
2
5
64
1.30
115450--115497
21
2.2
22
85
3
62
43
27
16
12
1.84
125639--125738
20
5.1
20
67
16
57
24
14
3
59
1.49
125673--125749
40
2.0
40
85
9
108
20
9
0
70
1.14
125673--125751
36
2.2
36
84
8
99
20
10
0
69
1.16
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
125745--125993
20
12.4
20
69
8
116
19
16
7
55
1.65
132136--132173
5
7.6
5
100
0
76
0
60
0
39
0.97
132502--132630
60
2.2
60
90
2
197
41
6
11
40
1.66
133107--133149
21
2.0
22
90
4
70
53
2
0
44
1.13
133181--133225
15
2.9
16
83
9
58
44
20
0
35
1.51

Tables:   1

The End!