Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01003422.1 Kokia drynarioides strain JFW-HI SEQ_116190, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51868

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8202--8438
52
4.6
52
86
3
336
24
16
25
34
1.95
12397--13086
344
2.0
344
98
0
1326
38
15
14
32
1.87
16115--16149
18
1.9
18
94
0
61
42
0
0
57
0.99
17203--17243
21
2.0
21
90
0
64
24
21
7
46
1.77
25498--25537
21
1.9
21
89
0
62
20
15
27
37
1.92
28539--28612
16
3.9
18
74
17
62
10
21
1
66
1.30
28559--28613
21
2.7
20
82
17
69
10
20
0
69
1.18
34446--34497
22
2.4
23
75
18
58
44
15
0
40
1.46
34451--34500
20
2.6
18
79
17
55
42
14
0
44
1.44
37653--37773
7
17.3
7
90
4
138
15
16
0
67
1.23
38719--38759
19
2.2
19
87
12
59
78
0
12
9
0.98
39841--39886
25
1.9
25
86
8
69
32
4
6
56
1.45
46363--46405
20
2.1
21
82
4
52
44
9
2
44
1.49
48312--48561
36
7.0
36
81
2
288
32
8
20
38
1.84
48969--49175
23
9.0
23
92
0
306
34
3
13
49
1.58
48988--49203
69
3.1
69
84
5
206
34
4
14
46
1.64

Tables:   1

The End!