Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01003432.1 Kokia drynarioides strain JFW-HI SEQ_116208, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  130999

Tables:   1   

This is table  1  of  1  ( 47 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1401--1443
18
2.3
19
84
11
54
27
0
4
67
1.10
3659--3686
2
14.0
2
100
0
56
50
0
0
50
1.00
7869--8041
89
2.0
88
85
5
233
15
15
17
52
1.76
8049--8181
64
2.1
62
92
4
221
15
14
18
51
1.76
13823--13930
48
2.2
48
80
3
119
37
21
28
12
1.89
13822--13950
23
5.4
25
77
9
94
37
19
29
13
1.89
15673--15723
21
2.3
21
77
12
50
33
21
17
27
1.96
16031--16084
16
3.4
16
69
5
56
33
3
7
55
1.45
16023--16095
31
2.4
31
100
0
146
38
2
5
53
1.39
16042--16103
16
3.9
17
67
14
51
41
1
3
53
1.27
18057--18114
28
2.1
28
96
0
107
41
18
6
32
1.78
18656--18711
26
2.1
26
83
9
69
37
8
7
46
1.63
32672--32702
16
1.9
16
93
0
53
22
16
0
61
1.34
42409--42435
8
3.4
8
100
0
54
51
0
37
11
1.37
45458--45503
18
2.5
19
76
16
53
56
2
0
41
1.11
53328--53360
17
1.9
17
93
0
57
27
0
0
72
0.85
56373--56417
25
1.9
22
86
13
63
28
0
4
66
1.11
56428--56472
18
2.5
19
89
7
67
31
4
2
62
1.27
56493--56656
83
2.0
82
96
2
303
40
10
4
43
1.60
58383--58551
23
7.3
23
87
7
220
39
23
20
17
1.92
58381--58539
69
2.3
68
90
2
246
39
23
20
16
1.92
61789--61831
17
2.5
17
92
3
68
51
0
0
48
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
61817--61848
11
3.0
11
95
4
57
65
0
0
34
0.93
62064--62097
15
2.3
15
90
5
52
32
2
0
64
1.08
65908--65947
3
13.3
3
100
0
80
67
0
32
0
0.91
67500--67604
51
2.1
51
83
7
133
42
9
0
46
1.42
74472--74500
14
2.1
14
100
0
58
37
6
13
41
1.72
77242--77294
15
3.5
15
77
22
58
71
3
0
24
1.02
77222--77294
31
2.3
33
84
13
107
65
5
1
27
1.22
77704--77733
15
2.1
14
93
6
51
63
3
0
33
1.11
77704--77737
8
4.4
8
85
7
52
64
2
0
32
1.08
84848--84897
24
2.1
23
89
10
75
22
6
0
72
1.07
91095--91146
25
2.1
24
82
3
59
48
0
3
48
1.20
93178--93224
25
2.0
25
83
8
62
65
0
2
31
1.04
93343--93380
17
2.1
17
90
9
58
65
5
0
28
1.14
93343--93379
18
2.0
19
89
5
58
67
5
0
27
1.12
94868--94898
11
2.7
11
95
5
53
51
6
0
41
1.27
96949--96997
24
2.1
22
85
7
62
55
4
4
36
1.38
102197--102251
27
2.0
27
82
6
67
43
3
1
50
1.30
104239--104295
3
19.0
3
100
0
114
66
0
0
33
0.92
114122--114160
8
4.9
8
87
0
51
58
0
0
41
0.98
114124--114159
17
2.1
17
94
0
63
63
0
0
36
0.94
114444--114508
35
2.0
34
82
14
84
47
10
3
38
1.54
114444--114508
33
1.9
35
84
12
91
47
10
3
38
1.54
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
115122--115146
12
2.1
12
100
0
50
16
0
0
84
0.63
116291--116728
162
2.7
162
81
7
524
27
14
27
31
1.95
120212--120243
16
2.0
16
100
0
64
37
12
12
37
1.81

Tables:   1

The End!