Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01003438.1 Kokia drynarioides strain JFW-HI SEQ_116217, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47095

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11279--11323
8
5.6
8
100
0
90
48
0
37
13
1.42
14233--16361
715
3.0
713
87
2
3029
33
16
20
28
1.95
23570--23720
31
4.9
31
81
15
197
24
17
10
47
1.79
23570--23708
60
2.3
59
85
12
176
25
17
10
46
1.80
23570--23792
91
2.4
91
84
9
292
24
16
12
47
1.80
23951--24136
60
3.1
60
86
3
232
48
10
15
25
1.76
23977--24136
31
5.3
30
72
17
116
48
10
15
25
1.77
24024--24114
29
3.1
28
74
11
101
56
6
13
24
1.61
24218--24314
48
2.0
48
97
0
185
34
14
22
28
1.94
24672--24762
9
9.9
9
71
13
60
60
0
1
38
1.04
24719--24818
19
5.3
19
71
23
77
63
0
5
32
1.16
24718--24820
10
10.7
10
73
16
76
63
0
4
32
1.16
25012--25111
9
11.6
9
69
15
59
33
2
2
63
1.17
25212--25528
89
3.6
87
81
7
331
35
7
16
40
1.77
35168--35310
62
2.3
62
83
7
166
40
6
12
40
1.68
46702--46749
15
2.9
17
82
11
55
58
0
4
37
1.18
46707--46777
27
2.6
28
82
6
94
57
0
4
38
1.18
46702--46727
3
8.7
3
100
0
52
69
0
0
30
0.89

Tables:   1

The End!