Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01003488.1 Kokia drynarioides strain JFW-HI SEQ_116307, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47167

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1173--1229
22
2.6
21
71
17
53
36
0
0
63
0.95
1213--1259
21
2.2
21
85
7
60
38
4
2
55
1.31
5859--5905
23
2.0
24
83
4
60
21
2
10
65
1.33
7399--7492
41
2.3
41
83
7
111
58
3
0
38
1.14
8890--8918
14
2.1
14
100
0
58
37
34
0
27
1.57
11872--11917
23
2.0
23
86
4
65
15
15
21
47
1.81
12013--12077
23
2.8
23
88
2
94
29
12
16
41
1.85
13073--13107
16
2.2
16
95
5
63
11
2
5
80
1.00
18528--18566
14
2.8
14
88
0
51
38
12
2
46
1.56
18996--19025
15
2.0
15
100
0
60
93
0
0
6
0.35
24187--24252
33
2.0
33
90
0
105
53
3
4
39
1.37
26890--26916
6
4.5
6
100
0
54
48
33
0
18
1.49
27168--27214
24
2.0
24
100
0
94
17
17
10
55
1.69
32898--32951
21
2.6
22
85
8
69
48
12
0
38
1.42
38345--38385
18
2.3
18
86
0
64
7
0
4
87
0.65
38456--38533
15
5.4
15
68
13
56
46
0
1
52
1.08
38461--38521
25
2.3
27
80
8
72
47
0
1
50
1.10
38454--38544
42
2.1
42
82
9
105
48
0
1
50
1.08
41459--41553
26
3.7
26
83
5
129
24
20
25
30
1.98
42287--42393
55
2.0
54
88
1
160
17
18
32
30
1.95
46924--46951
14
2.0
14
100
0
56
35
35
14
14
1.86

Tables:   1

The End!