Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01003501.1 Kokia drynarioides strain JFW-HI SEQ_116333, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 1795
ACGTcount: A:0.36, C:0.17, G:0.11, T:0.36


Found at i:157 original size:7 final size:8

Alignment explanation


    Indices: 130--155  Score: 52
    Period size: 8  Copynumber: 3.2  Consensus size: 8

        120 TCAACTTATG

                    
        130 TTTAATTT
          1 TTTAATTT

                    
        138 TTTAATTT
          1 TTTAATTT

                    
        146 TTTAATTT
          1 TTTAATTT

              
        154 TT
          1 TT

        156 AAGCCAATTT


Statistics
Matches: 18,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   8   18  1.00

ACGTcount: A:0.23, C:0.00, G:0.00, T:0.77


Consensus pattern (8 bp):   
TTTAATTT
Done.