Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01003525.1 Kokia drynarioides strain JFW-HI SEQ_116368, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  92752

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
424--449
5
5.2
5
100
0
52
61
0
0
38
0.96
1646--1671
7
3.7
7
100
0
52
42
11
30
15
1.82
2147--2181
16
2.3
15
90
9
54
37
0
0
62
0.95
2876--2938
18
3.4
18
80
2
63
28
0
6
65
1.17
3601--3631
14
2.2
14
94
0
53
48
0
0
51
1.00
4802--4880
40
2.0
39
92
4
133
24
24
12
39
1.90
23481--23530
26
1.9
26
87
0
73
18
22
10
50
1.76
42042--42084
18
2.4
18
80
7
52
46
2
2
48
1.27
57725--57783
28
2.1
28
90
0
91
38
10
3
47
1.54
57681--57833
78
2.0
77
89
1
234
34
14
9
41
1.77
57816--57954
62
2.3
59
84
7
172
32
13
12
41
1.83
58832--58895
17
3.9
17
72
27
59
62
6
4
26
1.39
58822--58913
30
3.1
30
90
3
132
64
5
5
25
1.37
80208--80263
25
2.3
25
84
6
71
21
16
28
33
1.95
80220--80267
25
1.9
25
95
0
87
18
12
29
39
1.88
83574--83661
43
2.0
43
100
0
176
29
13
18
38
1.89
85322--85350
6
4.8
6
100
0
58
34
51
0
13
1.42

Tables:   1

The End!