Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01003556.1 Kokia drynarioides strain JFW-HI SEQ_116417, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  107881

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
573--616
20
2.1
21
87
4
63
52
0
20
27
1.47
992--1053
24
2.8
21
77
13
70
4
8
16
70
1.28
995--1065
24
3.1
22
75
17
65
5
7
18
69
1.32
996--1065
21
3.2
21
75
6
59
5
7
18
68
1.33
1064--1113
15
3.6
14
78
15
59
6
0
20
74
1.03
1062--1156
12
7.8
12
76
11
79
5
2
18
73
1.12
993--1089
45
2.2
46
78
12
103
6
5
19
69
1.30
1082--1137
22
2.6
21
85
2
67
3
3
16
76
1.06
1135--1175
20
2.0
20
85
0
55
9
0
19
70
1.14
1593--1681
44
2.0
44
97
0
169
24
29
13
32
1.93
7944--7991
24
2.0
25
87
4
71
39
2
0
58
1.10
7949--7996
24
2.0
24
84
4
62
41
2
0
56
1.11
8716--8766
23
2.3
23
86
6
70
31
19
0
49
1.49
8748--8782
9
3.8
9
85
7
52
45
17
0
37
1.48
8784--8828
14
3.2
14
75
12
56
28
0
0
71
0.87
8786--8876
28
3.5
28
69
22
90
31
1
1
65
1.06
8788--8892
48
2.2
48
96
0
192
34
0
0
63
1.07
8799--8878
23
3.4
23
70
13
72
31
1
1
66
1.08
8788--8892
10
10.9
10
66
15
60
34
0
0
63
1.07
12642--12697
21
2.8
20
84
10
62
51
21
0
26
1.48
15264--15444
29
6.2
28
78
9
150
22
19
11
46
1.82
15264--15444
59
3.1
57
82
5
211
22
19
11
46
1.82
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15226--15422
88
2.2
87
81
4
225
22
18
12
46
1.82
28064--28138
33
2.3
33
83
4
89
25
22
18
33
1.97
68939--68979
21
2.0
21
85
9
57
24
9
19
46
1.80
76155--76401
130
1.9
130
98
0
476
36
22
8
32
1.84
80779--81017
36
6.6
36
79
1
183
27
16
20
35
1.94
80779--80982
72
2.8
72
81
1
212
26
17
20
35
1.95
80786--81005
72
3.1
72
81
1
208
26
16
20
36
1.93
84939--85029
40
2.3
40
94
1
157
43
8
23
24
1.81
90009--90050
21
2.0
21
85
0
57
38
16
21
23
1.93
90058--90204
23
6.5
24
79
9
132
44
22
17
15
1.87
91181--91232
21
2.2
24
70
29
56
0
38
5
55
1.24
91187--91237
21
2.3
22
93
6
86
0
39
5
54
1.24
94179--94205
6
4.5
6
100
0
54
48
0
33
18
1.49
94210--94383
40
4.2
40
85
5
215
42
9
22
24
1.84
94210--94389
81
2.2
81
83
6
229
42
10
22
24
1.84
94527--94551
9
2.8
9
100
0
50
20
0
20
60
1.37
94957--95009
21
2.4
22
84
12
72
18
9
30
41
1.82
97092--97168
38
2.0
38
97
0
145
31
11
18
38
1.86

Tables:   1

The End!