Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01003573.1 Kokia drynarioides strain JFW-HI SEQ_116444, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42751

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
851--887
11
3.5
11
78
14
51
43
0
0
56
0.99
849--889
20
2.0
21
95
4
75
43
0
0
56
0.99
1556--1591
18
2.0
18
88
0
54
61
0
0
38
0.96
2014--2801
39
20.2
39
69
3
323
25
18
29
26
1.98
1988--2650
78
8.5
77
79
4
492
25
19
28
25
1.98
1988--2650
156
4.3
155
80
3
598
25
19
28
25
1.98
2039--2801
117
6.5
117
71
6
393
25
18
29
26
1.98
14730--15122
29
13.3
29
80
5
396
35
2
26
35
1.71
14730--15114
59
6.5
59
81
5
377
35
2
26
35
1.71
14729--15147
30
14.2
29
75
11
320
35
2
26
35
1.71
15953--15990
11
3.6
11
79
13
53
42
0
0
57
0.98
16664--16744
17
4.8
17
87
0
108
58
3
2
35
1.29
16694--16743
6
8.7
6
78
8
50
60
2
0
38
1.09
22940--22983
21
2.1
21
86
0
61
25
4
40
29
1.75
23003--23042
15
2.7
15
88
0
53
47
7
32
12
1.69
29275--29432
78
2.0
77
87
3
228
49
10
15
24
1.76
31569--31659
45
2.0
45
100
0
182
41
17
6
34
1.75
37003--37045
3
14.0
3
80
4
50
58
0
4
37
1.19
41902--41969
30
2.3
30
100
0
136
20
39
20
19
1.92
41899--41968
15
4.6
16
79
10
76
20
38
21
20
1.94
42265--42373
53
2.1
53
100
0
218
14
18
23
43
1.87

Tables:   1

The End!