Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01000358.1 Kokia drynarioides strain JFW-HI SEQ_111143, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  229995

Tables:   1   

This is table  1  of  1  ( 43 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46034--46187
22
7.0
23
65
18
94
38
17
14
29
1.89
46018--46207
88
2.2
88
87
1
274
38
17
13
30
1.88
46013--46216
44
4.6
44
82
2
232
38
18
13
29
1.89
51223--51623
219
1.8
219
85
2
563
38
13
18
29
1.90
52960--53016
26
2.2
26
84
3
71
26
22
21
29
1.99
53596--53625
11
2.7
11
94
0
51
0
10
0
90
0.47
53596--53625
13
2.4
12
94
5
51
0
10
0
90
0.47
57007--57077
26
2.7
26
80
8
90
29
21
22
26
1.99
57140--57211
37
1.9
37
88
0
108
23
15
29
31
1.95
58936--58977
21
2.0
22
85
4
59
11
19
4
64
1.44
65109--65143
15
2.4
14
86
9
52
17
11
5
65
1.43
77170--77240
30
2.4
30
95
0
124
18
16
33
30
1.93
82591--82907
160
2.0
160
98
0
616
37
14
9
38
1.80
83402--83571
84
2.0
84
97
0
322
27
12
29
30
1.93
97660--97820
52
3.1
52
61
15
125
43
14
20
21
1.87
97617--97824
103
2.0
103
100
0
416
42
14
23
20
1.88
98053--100171
426
5.1
424
91
3
3405
33
16
15
34
1.90
103757--103813
21
2.7
21
71
15
55
35
17
21
26
1.95
112716--112770
21
2.6
21
91
2
83
49
7
5
38
1.54
112718--112801
21
4.5
18
78
16
59
50
4
3
41
1.41
115492--115571
30
2.7
30
75
11
76
50
1
1
47
1.17
131501--131543
10
4.5
10
85
8
63
83
0
16
0
0.64
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
144060--144104
17
2.6
18
85
3
56
57
15
8
17
1.63
144095--144303
104
2.0
104
99
0
409
34
17
16
31
1.92
150348--150412
30
2.2
30
97
0
121
41
23
9
26
1.84
152624--152808
20
9.4
20
77
6
146
38
21
29
10
1.87
163768--163819
24
2.2
24
92
0
86
40
19
17
23
1.91
165055--165155
50
2.0
50
96
0
184
30
14
16
37
1.89
165436--165498
31
2.0
31
96
0
117
38
9
31
20
1.85
167295--167333
21
1.9
21
89
5
62
12
12
7
66
1.43
183756--183823
33
2.1
33
94
0
118
39
22
20
17
1.92
185221--185262
19
2.3
18
84
12
50
59
4
0
35
1.19
189624--189671
20
2.4
20
86
6
62
29
12
27
31
1.93
189879--189932
20
2.7
20
88
0
72
25
9
33
31
1.88
196881--196972
46
2.0
46
93
0
157
17
20
28
33
1.95
200616--200678
30
2.1
30
82
11
76
38
23
1
36
1.65
203734--203805
26
2.8
26
87
4
92
45
15
16
22
1.84
203733--203805
6
11.3
6
76
12
56
45
15
17
21
1.85
203749--203823
13
5.8
13
79
7
73
45
17
18
18
1.86
209016--209056
20
2.0
22
85
9
59
17
29
17
36
1.92
212086--212118
2
16.5
2
93
0
57
0
48
0
51
1.00
217766--217853
46
1.9
45
82
11
108
35
19
12
32
1.89
229823--229870
25
1.9
25
83
8
62
31
10
0
58
1.32

Tables:   1

The End!