Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01003580.1 Kokia drynarioides strain JFW-HI SEQ_116453, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70392

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4792--4838
17
2.8
17
87
3
51
53
12
10
23
1.70
4803--4838
17
2.1
17
94
0
63
55
8
11
25
1.62
11067--11113
21
2.2
21
84
0
58
14
12
29
42
1.83
16281--16378
31
3.1
31
78
11
101
50
14
18
17
1.79
16362--16448
31
2.7
33
80
10
108
49
10
17
22
1.77
20822--20880
25
2.3
25
80
13
66
10
16
5
67
1.37
23477--23554
21
3.7
20
76
8
75
28
0
24
47
1.52
23474--23569
21
4.5
21
70
12
70
28
0
22
48
1.51
23474--23575
43
2.4
42
79
12
118
26
0
23
50
1.50
23825--23913
28
3.1
29
68
4
72
39
4
16
39
1.69
27389--27608
59
3.7
58
85
5
280
49
9
8
32
1.65
28543--28611
34
2.0
34
100
0
138
26
15
20
37
1.93
29606--29653
23
2.1
23
84
7
62
64
0
2
33
1.05
29634--29724
18
5.5
17
68
19
50
69
0
0
30
0.89
29670--29729
22
2.7
23
82
10
72
73
0
0
26
0.84
29669--29726
30
2.0
30
87
12
86
74
0
0
25
0.82
32781--32871
20
4.0
23
68
25
59
23
9
17
49
1.76
32792--32871
20
3.6
20
69
23
61
25
8
16
50
1.73
32782--32876
48
2.0
48
97
0
181
23
10
16
49
1.77
33052--33140
44
2.0
46
82
8
112
38
19
3
39
1.68
33126--33180
16
3.4
16
79
0
65
32
20
1
45
1.61
33657--33698
18
2.3
19
80
12
52
42
19
4
33
1.72
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44832--44913
33
2.5
34
76
11
89
60
4
4
29
1.38
45514--45548
18
2.0
17
88
5
52
17
22
14
45
1.84
46660--46716
9
5.7
10
76
19
57
26
1
0
71
0.95
46661--46717
20
2.8
20
79
10
64
26
1
0
71
0.95
52996--53041
24
1.9
24
86
0
65
54
6
2
36
1.39
54956--55007
24
2.2
24
85
0
68
55
7
3
32
1.46
58824--59014
42
4.6
41
76
8
154
40
14
16
27
1.88

Tables:   1

The End!