Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01003581.1 Kokia drynarioides strain JFW-HI SEQ_116454, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54554

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6129--6421
143
2.0
143
84
1
372
32
15
18
34
1.92
10496--10541
18
2.5
19
82
13
60
58
2
2
36
1.22
21868--21899
16
2.0
16
93
0
55
56
21
6
15
1.62
22575--22622
12
3.9
12
80
2
51
47
4
2
45
1.33
23517--23548
17
1.9
16
93
6
55
37
12
3
46
1.57
26570--26892
159
2.1
155
92
2
540
38
9
10
41
1.72
28553--28621
30
2.3
31
82
10
88
34
1
7
56
1.36
29378--29436
19
3.3
17
73
17
57
66
0
1
32
1.02
29383--29436
17
2.8
20
71
23
62
64
0
1
33
1.04
29837--29889
8
6.6
8
78
22
58
64
0
0
35
0.94
29837--29883
24
2.0
24
92
8
80
63
0
0
36
0.94
29845--29894
15
3.3
14
81
10
55
62
0
2
36
1.07
35176--35231
28
2.0
28
100
0
112
39
25
14
21
1.91
41724--41775
23
2.3
23
86
0
68
30
15
30
23
1.95
41732--41776
23
2.0
23
90
0
72
26
13
31
28
1.94
42327--42530
68
3.0
68
87
4
290
30
17
10
41
1.83
45265--45323
17
3.8
15
79
18
59
40
1
3
54
1.27
45270--45332
14
4.3
14
80
13
56
42
0
3
53
1.16

Tables:   1

The End!