Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01000363.1 Kokia drynarioides strain JFW-HI SEQ_111149, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46467

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8247--8371
50
2.5
49
73
10
119
38
12
28
20
1.89
8253--8510
99
2.6
98
78
6
272
39
13
26
20
1.90
8537--8716
99
1.8
98
84
3
245
36
14
28
20
1.92
8512--8729
49
4.4
49
73
10
176
35
16
27
21
1.94
8805--9521
40
18.0
42
74
12
454
32
23
17
26
1.96
8864--9015
75
2.0
76
89
1
234
30
25
17
26
1.97
8822--9126
117
2.5
118
86
9
397
30
24
19
26
1.98
9204--9473
77
3.5
77
83
2
315
35
21
15
26
1.94
8945--9514
195
2.9
195
83
4
714
33
22
17
26
1.96
8939--9513
78
7.2
79
78
9
363
33
22
17
26
1.96
11470--11502
16
2.0
17
88
5
50
21
6
0
72
1.05
11815--11859
2
22.5
2
100
0
90
51
0
0
48
1.00
24612--24645
16
2.1
16
88
0
50
61
20
5
11
1.50
25037--25083
20
2.3
21
85
3
69
40
2
0
57
1.11
26445--26490
15
3.1
16
78
12
53
43
6
0
50
1.28
29934--29959
3
8.7
3
100
0
52
65
0
0
34
0.93
34900--35150
133
1.9
135
95
1
461
48
11
7
33
1.67
36852--36905
2
28.0
2
92
7
94
0
50
0
50
1.00
41366--41462
29
3.2
29
72
13
88
48
3
16
31
1.62
41385--41482
29
3.3
29
68
13
81
56
5
14
24
1.58
46424--46467
2
22.5
2
95
4
81
50
0
0
50
1.00

Tables:   1

The End!