Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01000367.1 Kokia drynarioides strain JFW-HI SEQ_111158, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  79432

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
652--853
29
6.9
28
78
7
215
33
31
4
30
1.78
652--853
58
3.5
57
84
5
244
33
31
4
30
1.78
2306--2348
12
3.5
12
81
6
50
39
6
11
41
1.68
5218--5250
7
4.9
7
85
7
50
39
15
15
30
1.88
9476--9532
19
3.1
19
80
12
57
33
1
7
57
1.36
9490--9540
20
2.5
20
77
0
57
31
1
3
62
1.24
9697--9734
18
2.0
20
85
10
53
44
7
2
44
1.47
11225--11261
15
2.5
15
86
0
56
18
2
0
78
0.87
15477--15593
61
1.9
62
85
1
164
23
13
13
48
1.78
18339--18363
6
4.2
6
100
0
50
20
0
0
80
0.72
20685--20734
21
2.4
21
82
0
55
12
8
4
76
1.15
27867--27943
29
2.6
29
75
20
79
55
1
6
36
1.34
30431--30477
24
2.0
24
95
0
85
53
0
0
46
1.00
30433--30486
24
2.2
24
86
3
72
55
3
0
40
1.17
30404--30526
62
2.0
61
89
7
187
54
4
0
40
1.25
32455--32502
23
2.1
23
92
0
78
25
14
43
16
1.86
33159--33323
30
5.5
29
75
14
97
40
24
1
33
1.66
33160--33317
62
2.6
60
80
11
180
41
23
1
33
1.65
33190--33299
30
3.6
30
79
6
123
40
21
1
35
1.64
33268--33332
28
2.2
28
81
10
69
35
27
4
32
1.77
37956--38016
28
2.2
28
82
5
70
34
11
22
31
1.90
38002--38485
58
8.3
59
82
7
555
38
1
26
33
1.67
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
38029--38485
175
2.6
176
86
4
606
37
1
26
33
1.67
39645--39674
13
2.3
13
94
0
51
50
0
0
50
1.00
39645--39690
20
2.3
20
85
10
60
47
0
2
50
1.13
40357--40394
13
2.9
13
88
0
58
23
5
21
50
1.69
40360--40402
13
3.4
12
81
9
50
25
6
16
51
1.69
40399--40463
17
3.8
17
79
0
76
58
1
4
35
1.28
46230--46258
1
29.0
1
100
0
58
0
0
0
100
0.00
46230--46274
10
4.3
11
88
2
58
6
2
0
91
0.50
49202--49289
21
4.2
21
73
8
74
28
2
21
47
1.63
50761--50804
16
2.6
17
82
3
54
59
0
0
40
0.98
51395--51438
22
2.0
21
82
4
52
50
2
11
36
1.51
77892--77934
9
4.8
9
80
8
52
60
0
4
34
1.17
77892--77934
19
2.4
18
81
11
52
60
0
4
34
1.17

Tables:   1

The End!