Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01003692.1 Kokia drynarioides strain JFW-HI SEQ_116622, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34489

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
95--286
96
2.0
96
85
8
257
36
13
20
29
1.91
506--566
29
2.1
29
82
8
72
22
9
32
34
1.87
554--970
29
14.3
29
74
15
213
33
3
28
35
1.73
573--982
59
7.0
58
79
11
346
32
3
28
35
1.75
8431--8622
96
2.0
96
81
8
221
38
11
18
31
1.87
8843--8905
28
2.2
28
85
2
81
25
9
30
34
1.88
8979--9101
29
4.2
29
83
8
153
33
4
30
32
1.76
8862--9101
59
4.1
58
74
7
202
34
3
28
33
1.75
8891--9359
59
7.8
59
74
13
255
34
3
27
34
1.74
9064--9147
41
2.0
42
88
6
127
39
3
26
30
1.73
9106--9334
30
7.7
30
78
4
232
34
3
26
36
1.72
9016--9205
100
1.9
100
82
8
244
34
3
26
35
1.73
10367--10433
15
4.7
15
71
17
52
52
1
1
44
1.19
11119--11207
6
15.3
6
73
14
71
51
3
0
44
1.18
11111--11155
24
1.9
23
90
4
72
51
0
0
48
1.00
11126--11207
17
4.8
17
86
0
119
52
3
0
43
1.18
12577--12612
16
2.2
16
90
0
54
36
2
2
58
1.27
16494--16528
17
2.1
17
89
10
54
54
0
0
45
0.99
18803--18888
41
2.1
41
97
0
163
41
9
22
26
1.83
18903--19002
40
2.5
40
88
1
155
41
10
25
24
1.85
21555--21589
17
2.1
17
89
5
54
31
2
2
62
1.24
29569--29614
3
15.3
3
91
8
76
30
2
0
67
1.03
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31201--31235
17
2.1
17
88
0
52
20
34
0
45
1.51
31683--31748
34
1.9
35
90
3
107
27
6
22
43
1.76

Tables:   1

The End!