Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01003700.1 Kokia drynarioides strain JFW-HI SEQ_116637, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  126708

Tables:   1   

This is table  1  of  1  ( 52 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
348--416
23
3.0
24
83
10
81
13
24
21
40
1.89
5848--5913
23
2.8
23
86
9
80
37
0
4
57
1.19
5895--5958
15
4.2
15
72
18
60
42
0
1
56
1.09
5848--5914
22
2.9
23
80
14
75
38
0
4
56
1.19
5937--5980
22
2.0
23
86
4
63
38
2
0
59
1.10
6384--6486
40
2.6
38
77
18
102
33
1
2
61
1.22
7207--7252
18
2.6
18
76
16
51
30
6
0
63
1.20
7474--7553
19
4.2
19
76
21
62
60
2
3
33
1.28
7474--7524
21
2.6
19
80
19
61
60
3
0
35
1.15
9771--9901
55
2.4
55
88
0
190
51
17
6
23
1.69
9776--9932
55
2.9
55
84
1
145
50
18
8
22
1.74
12479--12693
104
2.1
104
99
0
421
45
7
16
31
1.75
15784--15812
2
14.5
2
100
0
58
51
0
0
48
1.00
20073--20142
23
3.0
23
78
2
86
42
17
11
28
1.83
21429--21816
129
3.0
129
90
1
616
28
13
23
34
1.93
26628--26702
38
2.0
38
97
0
141
28
30
22
18
1.97
30339--30367
14
2.1
14
100
0
58
27
51
0
20
1.47
33919--33964
18
2.7
18
84
15
62
30
2
0
67
1.03
33934--33995
26
2.5
24
78
17
63
24
3
3
69
1.18
35204--35238
18
2.0
18
94
5
63
68
0
0
31
0.90
35388--35436
19
2.7
18
81
12
55
28
2
2
67
1.13
37245--37295
26
2.0
24
85
7
66
56
1
9
31
1.43
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37291--37333
23
1.9
23
90
4
70
53
0
2
44
1.13
37287--37345
22
2.7
22
75
17
52
52
0
1
45
1.10
38493--38542
22
2.2
23
86
13
68
58
0
0
42
0.98
39398--39431
17
2.0
17
88
0
50
47
2
0
50
1.16
40102--40174
24
3.1
23
75
11
76
41
17
15
26
1.89
40113--40174
23
2.6
24
87
2
90
40
19
16
24
1.91
40112--40187
23
3.2
24
81
3
73
40
15
17
26
1.89
43898--44251
177
2.0
177
94
0
627
36
16
13
33
1.88
57393--57418
2
13.0
2
100
0
52
50
0
50
0
1.00
58806--58866
28
2.2
28
82
5
70
68
0
0
31
0.89
67758--67966
79
2.6
79
84
3
285
30
29
20
20
1.97
71459--71485
3
9.0
3
100
0
54
0
33
0
66
0.92
76524--76589
33
2.0
33
100
0
132
36
9
21
33
1.85
76529--76626
33
3.0
33
85
10
114
38
9
13
38
1.76
76827--76959
22
6.4
21
76
8
94
10
3
18
66
1.36
76946--77013
24
2.8
23
78
8
64
11
7
11
69
1.37
98284--98317
16
2.1
16
94
0
59
38
0
0
61
0.96
98343--98374
2
16.0
2
100
0
64
50
0
0
50
1.00
101216--101269
21
2.6
21
82
2
56
70
3
1
24
1.13
101218--101310
48
1.9
48
85
8
127
67
4
2
25
1.20
101217--101270
19
2.8
19
80
2
54
70
3
1
24
1.13
101487--101549
23
2.8
22
81
9
74
42
1
1
53
1.19
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
101551--101589
7
5.3
7
90
9
60
43
0
0
56
0.99
101551--101589
15
2.6
14
88
11
60
43
0
0
56
0.99
109838--109873
19
1.9
18
88
5
54
69
0
5
25
1.10
110303--110338
7
4.9
7
96
3
54
19
11
0
69
1.18
110871--110975
52
2.0
52
100
0
210
28
19
19
33
1.96
124231--124272
12
3.5
12
84
12
50
71
16
7
4
1.26
124313--124374
21
2.9
21
74
13
63
69
19
6
4
1.29
124346--124411
33
2.0
33
82
11
82
66
21
4
7
1.35

Tables:   1

The End!