Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01003720.1 Kokia drynarioides strain JFW-HI SEQ_116673, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45072

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3313--3498
20
9.4
20
69
15
95
23
12
5
58
1.57
3567--3610
22
2.0
22
86
0
61
52
4
0
43
1.22
3659--3717
19
3.0
20
80
14
68
20
16
10
52
1.72
5251--5298
11
4.2
11
78
7
51
43
2
2
52
1.24
5258--5321
6
11.0
6
76
6
60
46
1
1
50
1.20
5214--5321
17
6.4
17
77
7
112
46
0
1
50
1.18
5981--6055
13
5.8
13
74
13
57
56
1
5
37
1.31
7211--7480
30
9.1
29
79
6
251
35
24
4
36
1.76
7180--7505
59
5.5
60
78
9
269
34
23
5
35
1.79
7192--7445
89
2.8
89
84
5
316
35
22
4
37
1.75
7211--7480
89
3.0
88
82
6
280
35
24
4
36
1.76
7458--7584
29
4.3
29
72
7
89
35
25
7
30
1.85
7971--8126
78
2.0
78
98
0
303
33
22
12
31
1.92
19755--20211
208
2.2
208
91
1
738
37
17
22
22
1.94
20530--20619
6
15.8
6
75
11
82
45
0
2
52
1.13
20540--20619
23
3.5
23
83
6
92
46
0
2
51
1.14
20556--20619
29
2.2
29
83
5
85
48
0
1
50
1.10
20512--20619
17
6.4
17
80
7
121
45
0
2
51
1.15
23866--23928
28
2.2
28
91
0
99
28
9
28
33
1.88
23908--24093
58
3.2
57
78
9
169
37
6
25
29
1.82
24009--24102
29
3.2
30
70
16
90
36
5
25
32
1.79
23999--24092
30
3.2
30
69
22
90
38
6
27
27
1.81
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25889--25924
17
2.1
17
100
0
72
61
0
0
38
0.96
25889--25931
17
2.5
17
92
0
59
58
0
4
37
1.19
26450--26937
49
9.9
49
73
7
297
15
27
20
37
1.92
26450--26943
98
5.0
97
74
5
343
15
26
20
37
1.92
26416--26943
147
3.6
147
80
5
525
15
26
20
37
1.92
39309--39398
29
3.1
29
73
6
92
32
26
5
35
1.80
39381--39452
29
2.5
29
79
0
90
37
25
6
30
1.82
39449--39523
29
2.5
31
80
8
93
32
18
6
42
1.76
43979--44050
6
12.5
6
79
8
69
55
4
1
38
1.28
43979--44050
23
3.4
22
72
21
73
55
4
1
38
1.28
43959--44067
41
2.8
40
81
12
122
56
5
1
35
1.33
44001--44044
11
3.9
11
82
5
61
59
4
0
36
1.18
43945--44079
17
7.5
17
73
12
90
54
5
3
36
1.40

Tables:   1

The End!