Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01003822.1 Kokia drynarioides strain JFW-HI SEQ_116824, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  163945

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16078--16119
18
2.4
18
84
4
50
76
0
21
2
0.90
28574--28620
18
2.6
18
82
3
58
27
8
8
55
1.59
35114--35203
37
2.4
38
87
5
130
25
42
16
15
1.88
40810--40858
26
1.9
25
83
4
62
55
6
16
22
1.63
41725--41820
32
3.0
32
100
0
192
12
21
12
53
1.71
47667--47732
20
3.3
19
72
10
53
31
6
12
50
1.64
50221--50245
2
12.5
2
100
0
50
48
0
0
52
1.00
56136--56173
19
2.0
19
94
0
67
28
10
7
52
1.64
65818--65897
20
4.0
20
75
11
74
33
6
12
47
1.66
69352--69721
122
3.0
122
87
2
535
41
8
11
38
1.72
78297--78352
21
2.7
21
76
15
62
32
7
30
30
1.84
79596--79647
25
2.1
25
85
0
68
55
0
0
44
0.99
86838--86881
18
2.4
18
76
0
52
13
27
9
50
1.72
92537--92640
46
2.3
45
88
1
145
25
22
21
31
1.98
92606--93093
78
6.2
78
80
4
469
25
18
25
31
1.97
92648--93097
158
2.8
158
83
3
528
25
17
24
31
1.97
92706--93085
38
9.7
37
68
12
177
24
18
23
32
1.97
92626--93092
38
11.9
38
66
13
151
25
18
23
31
1.98
93236--93342
42
2.5
42
84
3
126
22
21
14
42
1.88
93379--93513
49
2.8
49
76
8
123
22
29
11
36
1.90
93481--93934
49
9.3
49
71
7
285
20
25
17
37
1.93
93461--93947
98
5.0
98
80
2
413
20
25
17
37
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
93533--93947
196
2.1
196
80
0
463
19
26
16
38
1.92
93434--93986
98
5.6
98
78
3
378
20
25
16
37
1.93
95659--95714
11
5.3
10
81
10
58
0
19
0
80
0.71
95659--95715
21
2.6
22
80
2
71
0
19
0
80
0.71
95675--95713
5
7.8
5
91
8
62
0
17
0
82
0.68
100535--100668
63
2.1
63
97
0
250
49
2
22
25
1.64
122574--122657
42
2.0
42
95
0
150
51
3
17
27
1.62
123069--123136
17
4.2
15
75
17
57
22
10
0
67
1.20
123067--123140
24
3.1
24
70
20
73
24
9
0
66
1.21
123073--123141
16
4.4
15
68
22
52
23
8
0
68
1.17
129422--129468
15
3.0
17
76
20
57
65
0
34
0
0.93
135126--135211
34
2.4
34
80
7
100
30
13
22
33
1.93
138662--138686
13
1.9
13
100
0
50
8
20
8
64
1.46
150924--150958
18
1.9
18
94
0
61
11
31
8
48
1.69

Tables:   1

The End!