Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01000384.1 Kokia drynarioides strain JFW-HI SEQ_111185, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  92773

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2155--2192
16
2.4
16
83
16
53
34
0
0
65
0.93
11242--11271
5
6.0
5
100
0
60
0
80
0
20
0.72
23363--23413
15
3.5
14
74
15
50
58
1
3
35
1.28
28041--28074
17
2.0
17
94
0
59
44
0
2
52
1.16
28831--28868
16
2.3
17
90
4
60
39
0
2
57
1.12
28860--28888
12
2.3
13
94
5
51
44
0
0
55
0.99
30743--30781
6
6.5
6
87
0
51
17
30
30
20
1.96
31327--31402
26
2.8
26
78
4
71
56
10
1
31
1.41
34167--34218
26
2.0
26
88
3
79
17
26
3
51
1.62
54534--54565
3
10.7
3
100
0
64
31
0
0
68
0.90
57384--57410
6
4.5
6
100
0
54
0
33
14
51
1.43
58015--58075
28
2.2
26
76
21
61
67
1
0
31
1.01
63099--63146
25
2.0
24
83
4
60
54
2
2
41
1.24
63436--63488
24
2.2
25
82
3
63
18
11
7
62
1.52
66938--66983
14
3.2
14
77
22
51
26
2
2
69
1.11
72288--72331
23
2.0
23
81
4
54
40
2
13
43
1.57
76672--76733
13
4.9
12
73
9
52
38
3
16
41
1.64
77082--77116
18
2.1
18
89
10
56
28
8
17
45
1.77
77432--77517
40
2.2
40
97
0
163
26
10
12
50
1.73
80688--80719
2
16.0
2
100
0
64
50
0
0
50
1.00
82427--82491
24
2.8
24
76
2
60
38
15
9
36
1.79
90623--90828
60
3.4
60
76
8
204
32
15
14
37
1.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
90836--91139
123
2.5
122
76
7
283
31
15
14
39
1.87
90895--91145
62
4.1
60
79
7
218
30
15
13
40
1.86
90836--91145
61
5.0
61
76
6
223
30
15
13
39
1.86
91003--91308
163
1.9
163
82
4
384
28
19
15
37
1.92
91152--91422
62
4.5
61
81
7
277
26
16
16
39
1.91
91152--91403
122
2.1
120
83
8
314
26
15
17
40
1.89
92239--92293
17
3.5
17
73
19
64
58
3
12
25
1.51
92239--92336
30
3.3
29
86
2
106
60
3
8
28
1.41

Tables:   1

The End!