Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01003862.1 Kokia drynarioides strain JFW-HI SEQ_116893, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  86125

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3148--3185
16
2.4
16
86
4
51
50
7
15
26
1.72
6026--6156
59
2.2
59
100
0
262
23
11
20
44
1.84
11179--11225
18
2.4
20
79
13
53
29
0
2
68
1.02
14125--14229
54
1.9
54
90
0
165
43
36
8
11
1.71
16675--16734
19
3.1
19
83
13
61
55
0
3
41
1.16
16670--16736
29
2.3
29
85
12
93
56
0
2
40
1.14
16670--16735
20
3.4
19
75
21
66
57
0
3
39
1.14
16689--16756
28
2.4
28
79
11
77
52
0
7
39
1.29
16754--16787
8
4.2
8
84
0
50
26
2
0
70
1.01
20927--21609
136
5.1
133
78
10
697
21
19
17
41
1.90
20927--21772
261
3.3
259
81
8
818
23
18
16
41
1.90
22759--22802
21
2.1
21
83
8
54
65
0
0
34
0.93
25330--25382
21
2.5
21
85
14
65
45
3
1
49
1.31
51916--51977
22
2.9
22
80
7
65
64
0
9
25
1.24
56146--56209
32
2.0
31
82
11
76
35
14
10
39
1.81
58612--58686
24
3.1
24
88
0
105
24
12
8
56
1.62
58628--58698
24
3.0
24
83
4
81
25
14
8
52
1.69
59592--59659
23
3.0
23
82
6
84
44
23
20
11
1.84
59592--59675
23
3.7
23
84
4
80
45
23
19
11
1.83
62019--62064
24
1.9
25
86
8
69
47
2
0
50
1.13
63067--63117
21
2.4
21
100
0
102
52
0
7
39
1.30
63715--63752
15
2.7
15
88
8
53
36
0
5
57
1.21
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64849--64873
9
2.8
9
100
0
50
36
0
0
64
0.94
79030--79560
84
6.3
83
86
2
634
30
17
21
31
1.96
80264--80531
89
3.0
89
98
0
509
43
13
17
25
1.85
84009--84078
29
2.3
29
83
9
79
47
7
10
35
1.65
84024--84082
29
2.0
30
90
3
93
47
10
8
33
1.68
84034--84103
29
2.3
29
85
4
86
41
12
10
35
1.77

Tables:   1

The End!