Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01003875.1 Kokia drynarioides strain JFW-HI SEQ_116909, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  112042

Tables:   1   

This is table  1  of  1  ( 39 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2445--2475
11
2.8
11
90
0
53
54
19
16
9
1.68
10332--10362
6
5.2
6
100
0
62
51
0
32
16
1.44
12945--12999
21
2.7
19
78
10
56
32
0
5
61
1.19
28993--29053
31
2.0
31
86
0
86
50
1
3
44
1.28
29038--29079
22
2.0
21
85
4
57
47
2
0
50
1.14
30664--30713
24
2.0
26
88
11
77
62
6
12
20
1.50
31950--31993
23
2.0
23
86
4
63
40
15
4
38
1.68
32092--32125
16
2.2
16
94
5
61
20
5
17
55
1.62
32354--32393
15
2.6
17
77
22
52
27
0
10
62
1.27
35973--36031
31
1.9
31
86
3
84
44
1
8
45
1.44
36740--36925
50
3.7
50
80
0
228
26
12
22
38
1.90
36741--36925
100
1.9
100
90
0
298
26
12
22
38
1.90
37895--37954
30
2.0
30
100
0
120
33
10
16
40
1.82
39631--39682
26
2.0
26
100
0
104
57
15
11
15
1.65
52930--52990
25
2.5
24
81
7
68
60
4
1
32
1.28
53289--53355
31
2.2
30
81
10
73
25
17
8
47
1.77
53241--53429
88
2.1
88
85
5
249
26
13
10
48
1.75
53612--53651
21
2.0
20
86
13
57
72
12
2
12
1.22
53632--53756
60
2.1
60
85
5
173
53
8
11
27
1.64
57257--57379
63
2.0
63
93
0
210
40
13
6
39
1.71
57886--57928
21
2.1
20
86
4
59
60
4
23
11
1.50
58445--58513
18
3.7
18
77
11
75
36
0
1
62
1.04
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
62080--62116
2
18.5
2
100
0
74
51
0
48
0
1.00
62797--62822
12
2.2
12
100
0
52
23
0
15
61
1.33
65338--65385
22
2.2
21
88
3
69
68
2
2
27
1.11
65338--65385
21
2.2
22
85
10
64
68
2
2
27
1.11
67712--67754
21
2.0
22
90
4
70
44
0
0
55
0.99
72003--72052
18
2.8
18
75
3
57
38
0
2
60
1.09
73417--73587
60
2.9
57
81
7
191
47
11
15
25
1.78
73419--73587
57
2.9
58
82
6
191
47
11
15
24
1.78
74066--74130
31
2.1
31
86
8
89
53
21
1
23
1.54
74924--74952
14
2.1
14
100
0
58
6
13
58
20
1.58
75686--75722
17
2.2
17
100
0
74
37
16
5
40
1.71
79507--79594
47
1.9
45
81
6
106
32
5
6
54
1.50
81933--82001
20
3.6
19
80
9
79
60
5
0
33
1.20
81942--82006
18
3.6
18
76
21
64
55
4
0
40
1.21
81983--82031
25
2.0
25
84
11
66
48
2
0
48
1.12
82243--82288
23
2.0
23
87
8
67
34
4
2
58
1.30
88720--88782
31
2.0
31
100
0
126
31
28
15
23
1.96

Tables:   1

The End!