Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01003914.1 Kokia drynarioides strain JFW-HI SEQ_116982, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40702

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
488--527
22
1.9
22
90
10
66
17
25
2
55
1.55
10814--10849
18
2.0
18
100
0
72
22
5
16
55
1.62
11493--11537
13
3.4
13
81
6
54
15
0
35
48
1.45
11493--11549
27
2.1
28
83
3
71
15
0
31
52
1.43
11704--11785
28
2.9
29
76
7
89
21
2
19
56
1.54
11754--11806
21
2.5
21
81
0
61
26
1
18
52
1.56
22218--22256
20
2.0
20
89
0
60
38
2
2
56
1.27
25083--25133
16
3.2
16
85
0
66
29
25
3
41
1.73
25244--25340
48
2.0
48
97
0
185
21
12
24
41
1.88
26746--27114
30
12.2
30
73
13
206
37
1
23
37
1.65
26667--27104
29
14.5
30
70
13
204
37
2
23
36
1.67
26682--27114
59
7.2
60
73
13
264
38
2
23
36
1.67
26797--26979
98
1.9
99
86
3
262
40
0
21
37
1.58
27924--27971
10
4.8
10
81
0
51
33
0
10
56
1.34
28847--28963
46
2.5
48
84
5
150
27
23
11
36
1.90
28893--29169
105
2.6
104
87
4
378
28
22
12
36
1.90
29143--29213
37
1.9
37
94
0
124
28
25
12
33
1.92
29355--29746
39
10.1
39
69
7
170
26
19
29
24
1.98
29387--29928
78
7.0
78
77
5
308
27
19
27
24
1.99
29510--29629
38
3.1
38
74
9
109
31
23
25
20
1.98
29466--29908
77
5.7
78
75
6
355
27
18
27
25
1.98
32146--32289
63
2.3
64
80
3
166
25
15
26
32
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34926--34957
15
2.1
16
94
5
57
71
0
0
28
0.86

Tables:   1

The End!