Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01003960.1 Kokia drynarioides strain JFW-HI SEQ_117051, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52977

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1105--1379
150
1.8
149
91
2
453
34
20
24
21
1.97
1285--1517
126
1.8
128
88
7
366
33
16
27
22
1.95
2965--3006
18
2.3
19
91
4
68
45
4
2
47
1.36
3197--3231
7
4.9
7
89
3
52
57
0
0
42
0.99
4337--4796
59
7.8
58
87
5
593
34
31
2
31
1.72
5886--6126
126
1.9
127
82
2
306
28
16
24
29
1.97
7062--7098
19
2.0
19
89
5
58
24
5
5
64
1.36
13060--13120
30
2.0
30
87
9
88
44
3
6
45
1.46
21278--21414
70
2.0
70
94
0
238
20
13
10
54
1.69
21495--21520
5
5.2
5
100
0
52
0
0
19
80
0.71
21516--21586
34
2.3
30
83
11
81
30
15
12
40
1.85
37493--37601
57
1.9
57
81
9
134
35
15
8
40
1.77
39042--39072
12
2.5
13
94
5
55
25
0
0
74
0.82
40174--40212
18
2.1
19
85
4
53
56
0
0
43
0.99
40487--40537
25
2.1
24
89
7
77
17
17
13
50
1.77
47343--47401
29
2.0
30
83
12
77
25
10
8
55
1.61
48110--48138
15
1.9
15
100
0
58
48
3
0
48
1.18
50620--50676
27
2.2
25
84
6
69
40
0
8
50
1.33

Tables:   1

The End!