Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01003963.1 Kokia drynarioides strain JFW-HI SEQ_117056, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  116845

Tables:   1   

This is table  1  of  1  ( 49 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2885--2932
18
2.8
17
78
6
53
31
0
0
68
0.90
6861--6921
28
2.2
28
82
5
70
26
6
4
62
1.40
10041--10094
22
2.5
22
78
0
63
66
3
7
22
1.33
16485--16532
24
2.0
24
87
0
69
56
2
0
41
1.11
19494--19537
20
2.2
20
83
0
52
22
11
13
52
1.72
21300--21332
17
1.9
17
88
11
50
36
0
3
60
1.12
23935--24001
22
3.2
21
77
12
75
7
5
16
70
1.31
23934--24023
41
2.2
41
84
6
110
6
5
15
72
1.25
24016--24098
43
1.9
43
82
4
105
10
4
16
67
1.37
28775--28809
3
11.7
3
87
0
52
62
0
5
31
1.18
30068--30110
22
2.0
21
82
13
52
55
2
0
41
1.12
30834--30868
12
3.0
12
91
4
54
74
14
0
11
1.08
35883--35908
7
3.7
7
100
0
52
23
0
0
76
0.78
43477--43517
19
2.3
18
91
8
66
31
4
12
51
1.60
44493--44539
21
2.2
21
88
7
69
31
10
10
46
1.73
51030--51080
23
2.2
24
96
3
95
52
0
0
47
1.00
51037--51086
23
2.2
23
92
0
82
60
0
0
40
0.97
51779--51812
18
1.9
17
88
5
50
52
0
0
47
1.00
53405--53952
292
1.9
292
92
0
918
32
27
11
28
1.92
60326--60373
25
1.9
25
86
0
69
45
14
2
37
1.57
61241--61322
4
20.8
4
73
12
62
65
0
30
3
1.09
61236--61322
17
4.9
18
77
14
83
65
0
31
3
1.09
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
61765--61810
24
1.9
24
90
0
74
47
23
15
13
1.80
65147--65241
30
3.2
30
66
8
86
46
11
5
36
1.63
65273--65321
16
3.2
16
73
26
61
32
0
8
59
1.27
65701--65741
21
2.0
21
85
0
55
51
14
2
31
1.56
66024--66052
12
2.3
13
88
11
51
65
0
0
34
0.93
69046--69194
75
2.0
75
97
0
280
27
16
21
34
1.94
70036--70075
19
2.1
19
95
0
71
60
10
12
17
1.59
71543--71585
18
2.5
17
76
3
50
34
0
2
62
1.08
71856--72167
176
1.9
167
83
11
415
41
14
8
36
1.75
81660--81684
13
1.9
13
100
0
50
36
0
8
56
1.29
82089--82133
21
2.1
21
100
0
90
44
13
4
37
1.64
82991--83063
35
2.1
35
100
0
146
27
13
32
26
1.94
87510--87543
17
2.0
17
88
11
52
47
5
5
41
1.52
90180--90204
7
3.6
7
100
0
50
40
12
0
48
1.40
92512--92611
42
2.4
42
89
3
139
32
49
6
13
1.66
99329--99378
21
2.4
21
89
0
73
52
14
6
28
1.65
106596--106663
6
11.8
6
74
14
63
42
2
1
52
1.25
106589--106666
17
4.6
17
82
6
95
41
2
1
55
1.22
106589--106666
11
6.9
11
73
16
70
41
2
1
55
1.22
108485--108689
30
6.9
29
78
12
195
35
26
4
32
1.78
108486--108656
59
2.9
60
88
3
240
36
25
3
33
1.73
108493--108697
59
3.5
59
81
6
186
36
26
4
32
1.77
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
108613--108704
29
3.1
28
75
7
67
36
28
5
29
1.79
111443--111495
24
2.2
25
83
10
65
50
0
3
45
1.19
111564--111606
18
2.4
18
85
14
54
58
2
2
37
1.24
113911--114002
25
3.7
27
72
16
92
50
4
0
45
1.21
114794--114886
31
3.0
30
79
4
105
51
9
2
36
1.47

Tables:   1

The End!