Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01003965.1 Kokia drynarioides strain JFW-HI SEQ_117058, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  98987

Tables:   1   

This is table  1  of  1  ( 50 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1477--1510
14
2.3
15
90
5
52
26
8
0
64
1.22
4568--4665
47
2.1
48
92
1
162
32
7
26
33
1.84
10650--10700
21
2.4
21
80
0
57
39
35
11
13
1.82
10744--10785
7
6.0
7
94
0
75
14
26
28
30
1.95
11847--11878
3
10.7
3
100
0
64
31
0
0
68
0.90
16206--16250
23
1.9
24
82
13
58
48
6
4
40
1.49
16285--16361
27
2.8
27
92
5
111
67
1
2
28
1.12
19125--19201
11
6.9
11
75
12
68
24
5
1
68
1.17
19184--19241
23
2.6
22
76
12
64
34
3
5
56
1.38
19285--19347
24
2.6
25
72
18
62
33
0
4
61
1.17
20452--20504
20
2.9
18
76
15
56
33
7
1
56
1.38
25591--25878
145
2.0
144
93
4
492
23
18
14
43
1.87
48112--48146
2
17.5
2
93
0
61
45
0
54
0
0.99
48830--48884
22
2.5
22
90
0
83
25
3
5
65
1.31
48830--48936
11
9.4
11
67
11
63
27
4
4
63
1.34
53052--53103
11
5.1
10
77
11
52
44
7
1
46
1.43
53066--53105
20
2.0
20
90
4
64
42
7
0
50
1.30
57094--57179
44
2.0
43
82
6
104
26
25
9
38
1.86
57125--57262
42
3.3
41
85
8
165
24
25
10
39
1.86
60101--60154
28
2.0
27
85
7
74
59
0
7
33
1.25
59842--60397
283
2.0
279
84
7
741
43
3
9
43
1.55
59838--60397
134
4.0
131
77
15
511
43
3
9
43
1.54
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
62967--62995
15
1.9
15
100
0
58
0
55
31
13
1.39
69109--69157
25
2.0
25
100
0
98
20
16
20
42
1.89
71820--71851
16
2.1
15
94
5
55
78
0
0
21
0.76
76273--76318
25
1.9
25
86
8
69
34
4
6
54
1.46
77382--77424
18
2.3
19
88
8
61
23
2
2
72
1.08
77414--77445
14
2.4
14
94
5
57
25
6
0
68
1.12
80275--80322
12
4.2
11
84
15
62
18
2
2
77
0.97
80275--80323
5
8.8
5
81
16
53
20
2
2
75
1.00
80275--80323
17
2.9
16
87
9
62
20
2
2
75
1.00
80275--80323
22
2.2
23
92
3
82
20
2
2
75
1.00
80286--80326
11
3.7
11
84
12
57
21
0
2
75
0.92
81239--81296
21
2.7
21
81
5
62
81
1
10
6
0.95
82334--82379
25
1.9
25
86
8
69
34
4
6
54
1.46
87829--87981
61
2.6
57
84
9
220
26
20
16
36
1.94
87889--88056
91
1.8
91
86
5
241
30
16
16
36
1.91
87990--88105
61
1.9
61
92
0
196
28
21
14
35
1.93
88265--88407
72
2.0
72
98
0
277
26
17
16
39
1.90
89164--89220
17
3.5
17
69
9
55
63
3
14
19
1.44
89157--89220
32
2.0
32
90
3
101
65
3
12
18
1.38
89170--89263
30
3.1
30
81
6
82
64
3
7
24
1.34
93814--93841
14
2.0
14
100
0
56
42
7
0
50
1.30
94615--94692
25
3.2
24
82
8
77
10
5
11
73
1.25
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
94615--94692
12
6.4
12
69
8
59
10
5
11
73
1.25
94621--94690
36
1.9
36
91
0
113
11
5
12
70
1.33
94615--94733
61
2.0
60
81
9
143
10
5
13
69
1.34
94874--94908
17
1.9
19
88
11
56
17
0
5
77
0.96
95252--95287
10
3.7
10
85
7
56
16
16
0
66
1.25
95252--95289
19
2.0
19
100
0
76
15
15
0
68
1.22

Tables:   1

The End!