Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01003972.1 Kokia drynarioides strain JFW-HI SEQ_117067, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  151796

Tables:   1   

This is table  1  of  1  ( 38 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
735--859
41
3.0
41
82
0
160
18
28
20
33
1.96
9311--9345
18
2.0
17
88
5
52
74
2
5
17
1.14
14996--15035
15
2.5
16
84
8
55
35
2
0
62
1.09
19837--19995
79
2.0
79
86
0
219
47
15
6
30
1.71
20174--20240
16
3.8
18
82
5
68
44
1
1
52
1.19
21685--21739
27
2.0
27
100
0
110
34
7
21
36
1.81
26644--26685
22
1.9
22
90
0
66
21
7
11
59
1.56
34056--34081
8
3.2
8
100
0
52
46
0
0
53
1.00
41606--41632
3
9.0
3
100
0
54
33
0
0
66
0.92
48282--48324
17
2.6
16
85
7
59
51
0
4
44
1.22
48820--48855
3
12.0
3
87
0
54
69
0
27
2
1.02
49425--49482
29
2.0
29
86
3
82
51
8
8
31
1.63
52895--52946
26
2.0
26
84
0
68
32
9
3
53
1.51
53504--53559
22
2.6
21
71
18
53
53
0
0
46
1.00
53504--53573
24
3.1
24
72
15
60
50
0
2
47
1.16
59455--59517
31
2.0
31
96
0
117
22
33
15
28
1.95
60596--60621
2
13.0
2
100
0
52
0
50
0
50
1.00
69105--69131
6
4.5
6
100
0
54
14
37
14
33
1.88
72384--72545
81
2.0
81
97
0
306
34
11
17
37
1.85
79815--79845
11
2.7
12
95
5
55
35
0
6
58
1.24
79838--79934
6
16.5
6
70
16
69
38
4
2
55
1.31
79826--79925
19
5.5
19
86
10
138
37
4
3
56
1.34
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
79815--79870
29
1.9
29
81
0
67
39
1
3
55
1.28
79826--79934
36
3.1
36
84
10
136
37
3
2
55
1.32
79944--79995
27
2.0
26
84
3
68
51
9
7
30
1.62
81932--81975
18
2.4
18
80
3
52
54
0
38
6
1.27
86425--87000
49
11.7
49
68
14
296
37
20
27
14
1.92
86432--87012
98
5.9
99
87
2
746
37
20
26
15
1.92
88220--88306
3
29.7
3
75
9
72
57
1
2
39
1.19
95416--95445
16
1.9
15
93
6
51
33
0
0
66
0.92
109993--110114
40
3.0
40
97
0
226
24
30
9
35
1.88
116406--116456
25
2.0
26
84
3
68
64
1
5
27
1.27
116395--116456
26
2.4
25
81
5
70
61
1
6
30
1.31
117400--117443
21
2.1
21
86
0
61
43
6
2
47
1.42
129270--129338
34
2.1
32
87
12
97
26
13
7
53
1.65
129330--129427
36
2.8
36
92
1
153
33
18
9
38
1.82
137296--137346
11
4.6
11
77
0
57
17
5
9
66
1.40
149587--149624
20
1.9
20
88
0
58
18
7
18
55
1.66

Tables:   1

The End!