Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01004024.1 Kokia drynarioides strain JFW-HI SEQ_117148, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 4117
ACGTcount: A:0.32, C:0.19, G:0.17, T:0.33


Found at i:1445 original size:21 final size:21

Alignment explanation


    Indices: 1421--1460  Score: 53
    Period size: 21  Copynumber: 1.9  Consensus size: 21

       1411 TGATCCTGAG

                   **            
       1421 TTTTAATTTTATTTTTTATTT
          1 TTTTAATAATATTTTTTATTT

                 *             
       1442 TTTTACTAATATTTTTTAT
          1 TTTTAATAATATTTTTTAT

       1461 CAATGGGGCA


Statistics
Matches: 16,  Mismatches: 3, Indels: 0
        0.84            0.16        0.00

Matches are distributed among these distances:
  21   16  1.00

ACGTcount: A:0.23, C:0.03, G:0.00, T:0.75


Consensus pattern (21 bp):   
TTTTAATAATATTTTTTATTT
Done.