Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01004036.1 Kokia drynarioides strain JFW-HI SEQ_117172, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  140064

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
697--759
28
2.2
28
82
2
72
33
14
26
25
1.94
791--870
30
2.8
28
79
11
81
30
5
30
35
1.79
765--1051
58
4.9
58
80
10
268
38
4
25
31
1.76
765--1051
59
4.9
57
80
9
269
38
4
25
31
1.76
770--1051
117
2.4
118
81
9
278
38
4
25
31
1.75
828--1142
29
10.9
28
71
14
178
39
2
24
33
1.69
946--1148
87
2.3
87
85
4
268
37
2
27
32
1.70
830--1092
58
4.6
56
80
8
233
39
3
24
32
1.71
4019--4060
16
2.6
16
75
24
52
59
0
0
40
0.97
4518--4581
29
2.2
29
84
13
87
53
4
1
40
1.31
4520--4581
30
2.1
30
88
8
92
53
4
1
40
1.32
6600--6651
26
2.0
27
81
11
63
30
0
3
65
1.10
8690--8765
30
2.5
30
82
4
91
15
27
26
30
1.96
21949--22005
30
1.9
30
96
0
105
26
15
28
29
1.96
26637--26674
2
19.5
2
89
5
60
50
0
47
2
1.15
31649--31730
42
2.0
42
90
0
128
19
3
12
64
1.41
31706--31731
12
2.2
12
100
0
52
23
0
7
69
1.14
32086--32125
21
2.0
20
85
5
53
60
0
2
37
1.11
48299--48442
45
3.3
45
61
24
108
34
23
14
27
1.94
48212--48459
86
2.9
85
91
3
381
35
23
14
26
1.93
51287--51327
16
2.5
17
80
15
50
31
0
4
63
1.15
52095--52141
24
1.9
25
86
4
69
42
6
0
51
1.27
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
84409--84440
16
2.0
16
93
0
55
34
6
34
25
1.81
89696--89736
21
2.0
21
90
9
66
24
7
7
60
1.48
97848--97906
24
2.5
24
86
8
77
33
10
16
38
1.83
97848--97917
23
3.0
23
81
10
63
37
8
17
37
1.80
107706--107786
31
2.7
29
73
7
81
38
8
9
43
1.69
107927--107998
30
2.3
32
81
9
87
55
12
2
29
1.51
107927--108007
31
2.6
31
82
5
94
55
11
3
29
1.52
124028--124088
28
2.1
30
82
11
74
40
1
0
57
1.08
133804--133833
2
15.0
2
100
0
60
50
0
50
0
1.00
139406--139447
20
2.1
20
95
0
75
54
7
0
38
1.28

Tables:   1

The End!