Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01004070.1 Kokia drynarioides strain JFW-HI SEQ_117230, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42337

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3961--3994
18
1.9
18
88
5
52
29
5
2
61
1.34
4463--4656
97
2.0
97
86
2
273
38
15
17
27
1.91
4865--4935
28
2.4
30
82
15
78
33
1
30
33
1.67
4923--5107
30
6.3
30
79
10
170
35
3
30
31
1.74
4923--5109
59
3.2
59
82
8
199
34
3
30
31
1.74
4925--5109
29
6.4
29
78
12
175
34
3
30
31
1.74
4872--5118
29
8.5
29
75
12
150
34
2
28
33
1.72
5108--5253
30
4.9
29
84
9
161
37
2
23
36
1.67
5638--5684
23
2.0
23
84
8
60
17
42
19
21
1.89
5841--5870
13
2.3
13
94
0
51
6
16
0
76
0.99
10261--10305
22
2.0
22
86
0
63
40
13
0
46
1.43
15588--15661
21
3.4
21
67
10
58
39
24
10
25
1.88
16209--16381
41
4.2
41
88
6
235
24
26
9
40
1.85
16242--16426
41
4.5
41
83
8
151
25
25
10
37
1.89
17087--17114
3
9.3
3
100
0
56
67
0
32
0
0.91
17194--17241
22
2.2
21
77
3
51
39
12
0
47
1.41
17952--17990
20
2.0
20
100
0
78
46
5
25
23
1.73
18392--18452
3
20.3
3
100
0
122
32
0
0
67
0.91
19025--19067
17
2.5
17
77
7
52
44
18
18
18
1.87
26022--26109
41
2.1
43
87
4
126
63
10
2
23
1.37
32279--32316
15
2.4
16
91
4
60
2
26
2
68
1.16
32697--32771
31
2.4
31
95
0
141
25
2
33
38
1.70
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32993--33023
16
1.9
16
93
0
53
61
0
16
22
1.34
33805--33858
26
2.1
26
89
0
81
29
25
18
25
1.98
39526--39579
27
2.0
28
82
10
67
31
20
7
40
1.80

Tables:   1

The End!