Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01004087.1 Kokia drynarioides strain JFW-HI SEQ_117257, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73048

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7689--7787
43
2.3
43
89
1
146
26
7
12
54
1.62
7693--7819
43
3.0
43
82
2
112
25
10
11
53
1.67
10189--10370
85
2.1
85
97
1
346
19
3
30
46
1.67
10705--10834
42
3.1
43
80
5
149
25
8
8
57
1.56
11160--11307
48
3.1
48
92
0
242
34
13
4
47
1.64
11739--11802
24
2.7
24
85
0
83
51
7
12
28
1.67
14650--14822
17
9.6
17
75
10
130
37
2
5
53
1.40
14679--14751
23
3.2
23
86
3
94
36
0
6
56
1.26
14679--14821
6
24.7
6
72
19
81
40
2
4
52
1.35
14721--14836
52
2.2
52
98
0
223
44
5
1
48
1.35
14721--14836
17
6.7
17
76
9
92
44
5
1
48
1.35
16563--16951
30
13.2
29
70
14
201
37
25
1
35
1.66
16595--16732
58
2.3
59
84
6
172
41
21
0
36
1.59
16563--16949
59
6.6
60
73
13
211
37
25
1
35
1.66
16754--17008
29
8.7
29
75
12
148
34
25
2
37
1.71
24403--24485
33
2.5
33
78
3
87
30
18
16
34
1.93
50224--50263
17
2.4
17
86
0
53
37
15
40
7
1.75
50342--50379
18
2.2
18
90
9
62
13
13
23
50
1.76
57250--57384
67
2.0
67
97
0
252
22
22
17
37
1.94
65550--66205
333
2.0
330
89
2
992
27
20
18
33
1.96
71282--71306
11
2.3
11
100
0
50
44
8
0
48
1.32

Tables:   1

The End!