Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01004102.1 Kokia drynarioides strain JFW-HI SEQ_117274, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  148655

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
159--209
14
3.6
14
83
0
57
23
23
23
29
1.99
171--217
21
2.2
21
81
7
51
23
21
23
31
1.98
2554--2590
3
12.3
3
88
0
56
62
0
2
35
1.10
6731--6803
21
3.5
21
84
0
92
24
20
24
30
1.99
6731--6803
7
10.4
7
74
0
56
24
20
24
30
1.99
10208--10243
12
3.0
12
87
0
54
75
2
8
13
1.15
14873--14922
11
4.5
11
82
12
66
0
14
0
86
0.58
14872--14923
17
2.9
17
88
5
77
0
15
0
84
0.62
15970--16019
18
2.8
19
80
14
54
10
30
0
60
1.30
32275--32380
53
2.0
53
98
0
203
24
9
31
34
1.87
34970--35040
36
2.0
36
97
0
133
30
25
11
32
1.91
35697--35791
47
2.0
47
100
0
190
42
14
16
26
1.87
37611--37650
12
3.3
12
86
13
64
0
37
0
62
0.95
40251--40292
22
2.0
20
86
9
57
45
0
2
52
1.13
40248--40318
25
3.0
23
78
17
65
46
0
1
52
1.09
40289--40338
26
1.9
26
84
8
66
48
0
0
52
1.00
40856--40896
18
2.4
17
91
4
64
46
0
0
53
1.00
40852--40890
21
1.9
20
89
5
60
43
0
0
56
0.99
52688--52800
41
2.8
41
87
2
147
36
8
27
27
1.86
66882--66915
14
2.5
14
90
4
52
47
8
14
29
1.75
83748--83797
21
2.4
21
82
0
55
42
28
20
10
1.84
86542--86625
37
2.3
37
82
0
105
23
29
20
26
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
86726--86780
26
2.1
26
86
0
74
23
21
25
29
1.99
96657--96696
15
2.7
15
84
0
53
10
32
7
50
1.64
114689--114728
21
1.9
21
85
10
55
67
5
27
0
1.11
121177--121221
18
2.5
17
75
10
54
28
37
13
20
1.90
121223--121267
7
6.4
7
92
0
63
17
20
26
35
1.95
128260--128315
27
2.0
29
86
10
80
44
37
5
12
1.65
129622--129657
18
1.9
19
94
5
65
44
0
5
50
1.25
132234--132258
13
1.9
13
100
0
50
40
8
8
44
1.63
136177--136210
13
2.6
13
100
0
68
26
26
14
32
1.95
145401--145506
34
3.1
35
78
10
103
36
23
17
21
1.95
145406--145655
108
2.3
110
84
3
337
37
21
18
23
1.94
148435--148490
16
3.4
16
76
14
51
73
7
1
17
1.15
148467--148585
20
5.7
20
67
14
71
69
3
3
23
1.18

Tables:   1

The End!