Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01004114.1 Kokia drynarioides strain JFW-HI SEQ_117296, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  103833

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6496--6530
2
17.5
2
93
0
61
54
45
0
0
0.99
6958--7123
91
1.8
91
96
0
305
26
15
25
32
1.95
12619--12708
45
2.0
45
97
0
171
37
11
14
36
1.82
18074--18151
28
2.8
28
86
5
95
35
19
24
20
1.95
24656--24719
33
1.9
34
87
3
94
26
9
21
42
1.83
25412--25438
12
2.2
12
100
0
54
7
22
44
25
1.79
51776--52010
108
2.2
109
81
3
294
33
21
11
32
1.90
51819--52025
56
3.8
54
79
6
215
30
22
12
34
1.90
52953--53006
18
3.3
18
63
36
50
59
3
7
29
1.42
52943--53035
30
3.1
30
93
0
150
61
3
6
29
1.37
56116--56174
31
1.9
31
82
0
73
33
6
13
45
1.70
57009--57049
7
6.0
7
85
5
57
82
0
0
17
0.66
57010--57049
13
2.9
15
82
17
59
85
0
0
15
0.61
57010--57050
15
2.8
14
88
7
55
85
0
0
14
0.60
58515--58540
13
2.0
13
100
0
52
23
0
0
76
0.78
59220--59263
21
2.1
21
95
4
81
68
0
4
27
1.09
59229--59279
21
2.4
21
87
6
68
70
0
3
25
1.04
59653--59706
10
5.7
9
76
20
56
35
3
0
61
1.14
59651--59705
9
5.6
10
79
12
51
34
3
0
61
1.13
59633--59704
28
2.6
27
80
8
81
37
4
0
58
1.18
64659--64834
38
4.8
38
76
10
179
31
15
19
32
1.94
64673--64807
69
2.0
69
98
0
261
31
17
19
32
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
66836--66875
20
2.0
20
85
5
53
32
0
2
65
1.06
68155--68207
21
2.5
21
88
11
74
32
26
13
28
1.93
68247--68323
21
3.5
22
75
16
70
41
27
7
23
1.81
85913--86036
61
2.0
61
100
0
248
16
4
43
35
1.69
90000--90043
23
1.9
23
90
0
70
47
15
2
34
1.58
91293--91326
18
1.9
18
88
5
52
29
0
5
64
1.17
92734--92783
20
2.5
20
80
3
64
8
10
18
64
1.48
92820--92899
12
6.9
12
76
8
58
6
5
20
68
1.30
100367--100656
52
5.6
52
82
6
331
26
14
22
36
1.93
100367--100656
102
2.8
103
81
6
327
26
14
22
36
1.93

Tables:   1

The End!