Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01004132.1 Kokia drynarioides strain JFW-HI SEQ_117325, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  119505

Tables:   1   

This is table  1  of  1  ( 38 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
69--253
60
3.2
58
81
12
236
10
17
30
41
1.83
66--239
54
3.1
54
82
12
224
9
17
29
43
1.81
2542--2568
3
9.0
3
100
0
54
66
0
0
33
0.92
6925--6986
5
13.0
5
77
19
62
79
1
0
19
0.82
6934--6987
4
13.0
4
81
14
58
77
1
0
20
0.86
6925--6986
19
3.3
19
80
19
76
79
1
0
19
0.82
6927--6967
7
6.1
7
81
18
52
82
0
0
17
0.66
6925--6987
23
2.7
24
81
16
87
77
1
0
20
0.85
6927--6982
28
2.1
27
90
6
87
80
1
0
17
0.80
10550--10593
17
2.6
17
79
10
54
68
2
2
27
1.14
12823--12878
17
3.2
17
74
20
53
51
1
0
46
1.11
12823--12862
13
3.5
12
83
16
50
47
2
0
50
1.14
12823--12862
4
10.5
4
80
20
50
47
2
0
50
1.14
15822--15883
21
3.0
21
68
11
56
54
9
12
22
1.67
15824--15883
20
3.0
20
69
13
59
55
8
13
23
1.65
16092--16163
20
3.6
19
78
14
74
51
8
11
29
1.66
16133--16181
20
2.5
20
86
0
71
51
12
14
22
1.75
16329--16377
16
3.0
15
80
14
53
57
6
14
22
1.59
16452--16498
21
2.3
21
88
3
69
70
2
8
19
1.24
16452--16499
10
4.7
10
74
5
51
70
2
8
18
1.22
16451--16514
18
3.4
18
79
12
65
70
4
7
17
1.29
23884--23920
3
12.3
3
100
0
74
67
0
32
0
0.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42351--42470
62
2.0
59
86
4
168
41
3
4
50
1.38
43203--43252
24
2.1
24
100
0
100
42
28
8
22
1.81
66275--66423
58
2.6
57
77
5
138
25
11
6
56
1.59
66526--66567
21
2.0
21
86
9
59
64
7
2
26
1.32
68407--68528
61
2.0
61
93
0
208
46
9
20
22
1.80
69552--69600
6
7.7
6
97
2
71
48
14
36
0
1.44
69741--69769
2
14.5
2
100
0
58
0
51
0
48
1.00
95891--97394
824
1.8
813
86
4
2153
37
12
12
38
1.80
98766--98952
40
4.7
40
78
7
175
27
17
19
35
1.94
98798--98952
79
2.0
79
80
5
179
26
16
20
36
1.93
100767--100870
51
2.0
51
100
0
208
19
35
17
27
1.94
102945--102988
19
2.2
19
84
12
52
63
4
0
31
1.14
104626--104739
40
2.8
40
77
0
120
36
16
14
31
1.90
112498--112565
24
2.8
24
80
8
84
25
23
23
27
2.00
113268--113322
21
2.6
21
88
0
74
36
20
20
23
1.95
116951--117030
40
2.0
40
82
4
99
37
17
15
30
1.90

Tables:   1

The End!