Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01004190.1 Kokia drynarioides strain JFW-HI SEQ_117423, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 882

Length: 1471
ACGTcount: A:0.32, C:0.16, G:0.19, T:0.34


Found at i:537 original size:12 final size:12

Alignment explanation


    Indices: 520--546  Score: 54
    Period size: 12  Copynumber: 2.2  Consensus size: 12

        510 ATTCCTTCTA

                        
        520 AAAGTTCATATC
          1 AAAGTTCATATC

                        
        532 AAAGTTCATATC
          1 AAAGTTCATATC

               
        544 AAA
          1 AAA

        547 ATAGTACTAG


Statistics
Matches: 15,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  12   15  1.00

ACGTcount: A:0.48, C:0.15, G:0.07, T:0.30


Consensus pattern (12 bp):   
AAAGTTCATATC
Done.