Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01004191.1 Kokia drynarioides strain JFW-HI SEQ_117424, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57067

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11726--11795
33
2.2
33
84
2
88
70
12
5
11
1.33
11696--11776
12
7.1
12
68
10
53
70
14
4
9
1.31
11770--11840
20
3.5
20
77
11
65
64
19
7
8
1.44
11798--11870
21
3.5
21
77
5
76
65
23
5
5
1.35
14568--14634
34
2.0
34
100
0
134
35
5
5
52
1.51
16087--16145
29
2.0
29
96
0
109
38
20
0
40
1.53
22411--22435
12
2.1
12
100
0
50
36
8
0
56
1.29
32234--32295
23
2.6
25
82
14
78
37
1
0
61
1.06
32957--33497
271
2.0
271
95
0
967
24
20
28
26
1.99
34933--34986
14
3.6
14
72
18
54
70
1
0
27
0.98
35110--35175
32
2.1
31
82
2
78
24
24
27
24
2.00
37102--37127
4
6.5
4
100
0
52
76
0
23
0
0.78
40232--40265
7
4.9
7
92
0
59
14
29
2
52
1.56
41669--41752
29
2.8
29
82
13
84
45
2
1
51
1.22
43623--43679
6
9.5
6
100
0
114
35
31
0
33
1.58
55071--55143
12
6.1
12
70
12
60
72
16
4
6
1.22
55101--55152
24
2.2
24
93
3
88
75
17
0
7
1.03

Tables:   1

The End!