Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01004223.1 Kokia drynarioides strain JFW-HI SEQ_117479, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  128656

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
342--502
80
2.0
80
100
0
322
39
27
13
19
1.90
2228--2268
18
2.3
18
86
0
64
41
0
0
58
0.98
2229--2281
18
2.8
19
85
5
63
43
1
0
54
1.11
2350--2389
18
2.2
18
95
0
71
50
7
5
37
1.53
2649--2694
19
2.4
19
82
7
58
76
4
0
19
0.96
3649--3722
10
7.7
10
70
17
50
28
2
4
64
1.25
3649--3721
19
3.8
19
73
16
62
27
2
4
65
1.24
5594--5640
15
3.3
15
76
8
53
34
0
2
63
1.06
5771--5813
18
2.4
18
88
7
61
46
0
0
53
1.00
9779--9832
22
2.5
22
82
14
67
70
1
0
27
0.98
9912--9937
13
2.0
13
100
0
52
46
7
7
38
1.61
10163--10189
5
5.4
5
100
0
54
18
22
18
40
1.91
16985--17014
15
2.0
15
93
0
51
76
3
0
20
0.92
29548--29575
2
14.0
2
100
0
56
50
0
0
50
1.00
30571--30613
18
2.4
18
80
7
52
46
2
0
51
1.13
32514--32571
29
2.0
30
89
3
91
29
3
13
53
1.56
46247--46306
31
1.9
32
86
3
86
46
11
3
38
1.57
70163--70196
16
2.1
16
100
0
68
44
11
5
38
1.65
78340--78368
3
9.7
3
100
0
58
68
0
0
31
0.89
81395--81668
141
1.9
140
88
4
408
40
18
19
21
1.92
84536--84726
101
1.9
98
83
7
242
41
5
11
41
1.63
85964--86246
45
6.3
45
87
1
415
25
26
18
30
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
85987--86286
135
2.2
135
85
0
339
25
26
18
29
1.98
98489--98528
2
20.0
2
100
0
80
50
0
50
0
1.00
99864--99933
29
2.3
29
82
4
77
48
7
8
35
1.61
108449--108500
18
2.7
20
77
20
65
65
0
1
32
1.04
110168--110403
127
1.9
127
85
4
332
40
12
9
37
1.76
112643--112976
59
5.7
60
72
9
258
26
14
18
40
1.88
112641--112999
118
3.1
116
82
6
404
28
13
17
40
1.88
112922--113066
61
2.4
61
76
10
156
31
9
13
44
1.76
118547--118605
27
2.5
22
71
23
55
52
1
1
44
1.21
118554--118610
27
2.1
27
96
0
105
56
1
0
42
1.10
120521--120563
21
2.0
21
100
0
86
23
4
18
53
1.63

Tables:   1

The End!