Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01004227.1 Kokia drynarioides strain JFW-HI SEQ_117483, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43108

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--33
3
11.0
3
100
0
66
66
0
0
33
0.92
1241--1633
29
13.6
28
78
10
307
34
28
3
33
1.75
1232--1646
89
4.8
87
78
9
409
34
29
3
32
1.76
1236--1721
59
8.3
59
79
11
400
35
28
3
32
1.75
1480--1591
50
2.2
50
84
6
147
34
30
4
30
1.77
1421--1646
109
2.1
109
84
3
285
34
30
3
30
1.76
13433--13818
196
2.0
195
91
1
621
34
19
22
22
1.96
15365--15598
29
8.0
29
83
6
274
35
28
1
34
1.68
15365--15651
59
4.8
58
84
5
301
34
28
3
33
1.73
15365--15711
29
11.7
29
75
10
220
34
28
3
33
1.75
17755--17794
17
2.4
17
86
0
53
17
20
12
50
1.78
21082--21106
12
2.1
12
100
0
50
24
52
8
16
1.70
21731--21768
7
5.6
7
90
3
60
23
2
0
73
0.95
23378--23445
31
2.2
32
86
7
95
45
5
19
29
1.73
26270--26310
17
2.5
17
80
7
50
46
0
7
46
1.30
27598--27638
18
2.3
18
86
0
55
41
7
14
36
1.74
34751--34850
9
11.2
9
69
17
66
36
2
3
59
1.24
35075--35152
30
2.5
30
81
8
77
30
6
3
58
1.41
35636--35703
30
2.3
29
82
12
84
45
0
7
47
1.31
35625--36160
176
3.1
176
95
1
936
47
4
5
42
1.47
36053--36095
14
3.1
14
78
18
54
48
2
0
48
1.14
36051--36098
13
3.7
13
79
17
55
52
2
0
45
1.12
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
36656--36695
12
3.3
12
82
0
53
67
20
5
7
1.34
36698--36750
27
1.9
27
81
11
63
69
18
3
7
1.28
36765--36810
24
2.0
23
95
4
83
71
17
4
6
1.24
38647--38695
20
2.5
19
87
6
71
44
14
2
38
1.56
41172--41362
97
2.0
97
90
0
301
29
18
19
31
1.96
41461--41538
39
2.0
39
85
2
104
35
14
20
29
1.92
41599--41756
38
4.2
37
77
11
119
48
12
10
29
1.74
41628--41764
38
3.7
36
76
12
120
48
13
10
27
1.74
41897--41933
18
2.0
18
94
5
65
70
0
0
29
0.88

Tables:   1

The End!