Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01004241.1 Kokia drynarioides strain JFW-HI SEQ_117511, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29169

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1600--1853
115
2.2
114
84
6
309
35
17
23
24
1.95
1753--2354
202
2.9
206
82
5
682
37
19
21
21
1.95
2672--2758
6
15.2
6
71
17
69
44
0
3
51
1.18
2672--2752
17
4.8
17
87
0
117
44
0
3
51
1.19
2703--2765
17
3.0
21
76
23
71
44
0
3
52
1.17
3425--3460
3
12.0
3
87
0
54
63
2
0
33
1.08
4101--4126
5
5.2
5
100
0
52
19
61
19
0
1.35
4531--4672
30
4.7
31
81
7
159
35
25
4
35
1.76
4531--4672
59
2.4
60
82
7
155
35
25
4
35
1.76
4625--4793
59
2.9
57
79
7
187
33
27
3
34
1.74
4698--4817
29
4.1
29
73
9
93
35
26
1
35
1.67
4628--4797
58
2.9
58
80
8
175
34
27
3
34
1.74
4625--4817
59
3.3
58
76
7
185
35
26
3
34
1.73
9789--9850
20
3.1
20
76
6
72
62
0
3
33
1.11
10737--10771
18
1.9
18
94
0
61
28
8
20
42
1.81
11852--12022
83
2.1
83
98
0
333
29
18
14
38
1.90
14182--14260
30
2.6
30
82
9
97
29
18
11
40
1.86
14464--14632
60
2.8
60
80
7
182
50
11
14
23
1.76
14481--14654
60
2.9
57
81
9
188
50
11
13
24
1.74
16387--16436
16
3.1
16
77
8
57
48
0
4
48
1.20
16403--16455
22
2.4
23
71
6
56
47
0
3
49
1.19
22842--22866
13
1.9
13
100
0
50
32
4
0
64
1.12
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24145--24207
18
3.3
18
70
20
56
6
6
20
66
1.36
24156--24225
18
3.8
18
70
18
54
11
5
22
60
1.52
24148--24224
39
2.0
39
92
0
127
10
5
22
62
1.47
24145--24247
39
2.8
36
82
8
125
11
5
20
62
1.49
26290--26511
30
7.5
30
83
8
195
36
2
24
36
1.68
26284--26511
58
3.9
59
79
7
196
35
2
24
37
1.68
28286--28443
85
1.9
85
86
0
226
25
22
13
37
1.92
28494--28651
85
1.9
85
82
0
199
25
22
14
36
1.93
28282--28817
208
2.6
208
86
1
743
24
22
16
37
1.93

Tables:   1

The End!