Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01004245.1 Kokia drynarioides strain JFW-HI SEQ_117519, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2571
ACGTcount: A:0.38, C:0.13, G:0.14, T:0.35


Found at i:2155 original size:14 final size:14

Alignment explanation


    Indices: 2136--2162  Score: 54
    Period size: 14  Copynumber: 1.9  Consensus size: 14

       2126 GCTTGCCTAT

                          
       2136 CATAGTTGGATCAC
          1 CATAGTTGGATCAC

                         
       2150 CATAGTTGGATCA
          1 CATAGTTGGATCA

       2163 TATAAAAATA


Statistics
Matches: 13,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  14   13  1.00

ACGTcount: A:0.30, C:0.19, G:0.22, T:0.30


Consensus pattern (14 bp):   
CATAGTTGGATCAC
Done.