Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01004317.1 Kokia drynarioides strain JFW-HI SEQ_117633, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  98817

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1161--1243
31
2.6
31
83
11
105
26
6
12
55
1.59
18549--18591
17
2.6
16
78
10
50
55
6
2
34
1.39
37389--37447
17
3.5
17
88
0
82
45
0
1
52
1.10
37389--37453
6
11.3
6
76
15
66
46
0
1
52
1.10
37389--37460
23
3.2
22
81
13
85
45
0
1
52
1.09
37461--37490
14
2.1
14
93
0
51
56
20
6
16
1.62
38127--38164
3
12.3
3
88
5
58
63
0
0
36
0.95
39156--39259
29
3.5
30
80
10
108
36
28
3
30
1.75
39190--39417
29
7.7
30
73
11
161
35
24
2
38
1.68
39222--39367
59
2.5
58
81
9
172
32
23
2
41
1.66
39256--39417
59
2.7
58
80
6
155
36
21
1
40
1.64
39340--39550
58
3.6
58
77
11
200
36
24
4
34
1.75
48844--48907
24
2.7
24
80
7
69
43
4
7
43
1.54
48844--48907
23
2.7
23
79
9
67
43
4
7
43
1.54
50014--50082
30
2.4
29
84
11
90
55
2
5
36
1.39
50600--50634
14
2.5
14
85
0
52
34
11
2
51
1.53
53726--53765
20
2.0
20
95
0
71
52
15
12
20
1.74
54892--54987
47
2.0
47
97
0
183
42
7
11
38
1.69
54892--54962
24
3.0
24
66
12
65
45
7
12
35
1.70
57025--57060
8
4.5
8
89
10
56
88
0
0
11
0.50
57025--57055
9
3.6
9
91
8
55
90
0
0
9
0.46
57657--57691
12
2.9
12
91
0
52
62
0
2
34
1.10
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58353--58405
24
2.2
24
100
0
106
60
7
0
32
1.25
76831--76877
24
2.0
24
91
0
76
31
17
25
25
1.97
78549--78580
14
2.1
16
88
11
50
50
0
3
46
1.17
78575--78614
3
14.3
3
85
15
59
27
0
0
72
0.85
80911--80964
19
2.8
20
77
8
58
48
0
5
46
1.25
81199--81256
29
2.0
29
86
6
82
53
8
1
36
1.42
86088--86142
26
2.3
26
84
12
73
45
0
9
45
1.35
92518--92617
43
2.4
42
88
5
139
31
26
19
24
1.98
92730--92830
42
2.4
42
83
1
121
34
27
13
23
1.93
95535--95577
20
2.2
20
86
0
59
32
0
2
65
1.06
95652--95851
41
4.9
41
75
3
127
24
22
20
33
1.97
95715--95823
41
2.7
41
85
0
164
20
25
19
34
1.96
98220--98371
41
3.7
41
79
0
160
19
29
19
31
1.96
98220--98377
82
1.9
81
83
6
203
19
29
18
31
1.96

Tables:   1

The End!