Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01004331.1 Kokia drynarioides strain JFW-HI SEQ_117655, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72717

Tables:   1   

This is table  1  of  1  ( 38 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
522--656
68
2.0
68
95
0
243
39
8
7
45
1.62
1993--2152
59
2.8
57
81
8
180
35
3
26
35
1.72
2047--2156
29
3.8
29
75
14
111
32
2
30
33
1.72
1993--2201
30
7.1
30
74
10
139
36
2
25
35
1.69
2110--2215
30
3.6
30
83
7
112
37
0
24
36
1.62
3290--3346
3
19.0
3
96
0
105
33
1
0
64
1.04
3971--4065
46
2.1
46
82
7
113
54
7
2
35
1.40
4000--4037
18
2.2
17
90
4
58
60
0
2
36
1.11
4502--5123
49
12.7
49
71
12
402
17
24
18
39
1.92
4501--5127
98
6.4
98
86
2
796
17
24
18
39
1.92
14583--14757
86
2.0
87
95
1
316
21
28
9
40
1.85
16868--16928
29
2.1
28
81
3
68
31
9
24
34
1.88
16945--17105
28
5.5
28
68
23
93
34
5
26
33
1.80
16915--17127
58
3.6
58
85
8
279
35
5
27
31
1.80
16915--17260
30
11.7
30
72
15
208
35
4
25
34
1.76
16915--17193
59
4.7
58
80
10
257
35
4
26
34
1.77
17087--17262
59
3.0
59
79
9
173
37
2
25
35
1.68
18005--18046
18
2.3
18
80
8
50
47
7
9
35
1.64
18289--18361
3
24.0
3
76
18
71
35
0
0
64
0.94
18289--18361
30
2.5
30
80
12
89
35
0
0
64
0.94
19032--19086
17
3.2
17
84
5
74
58
3
0
38
1.16
19033--19092
29
2.1
28
87
3
84
56
5
0
38
1.21
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30271--30303
17
1.9
17
88
11
50
24
0
0
75
0.80
32339--32366
3
9.3
3
100
0
56
0
32
0
67
0.91
35737--35769
2
16.0
2
93
6
57
48
0
3
48
1.17
41966--41996
2
15.5
2
93
0
53
45
0
3
51
1.17
56450--56489
18
2.3
18
91
4
64
10
10
10
70
1.36
56420--56482
18
3.3
18
82
10
72
9
4
12
73
1.24
56552--56596
12
3.8
12
79
5
56
4
2
20
73
1.11
56538--56617
32
2.5
32
85
4
99
7
2
20
70
1.24
56552--56603
23
2.2
24
86
3
70
5
1
21
71
1.17
56488--56579
20
4.2
20
70
20
60
8
4
20
66
1.37
56552--56603
12
4.5
11
76
9
50
5
1
21
71
1.17
56730--56788
9
6.3
9
75
19
50
20
0
8
71
1.12
62320--62578
129
2.0
130
99
0
511
39
12
17
30
1.87
67620--67661
19
2.1
20
83
16
52
26
0
7
66
1.17
68561--68690
67
1.9
67
93
0
224
37
13
10
38
1.79
68924--68954
2
15.5
2
100
0
62
48
0
0
51
1.00

Tables:   1

The End!