Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01004354.1 Kokia drynarioides strain JFW-HI SEQ_117697, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22871

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
54--117
28
2.2
30
78
15
73
43
0
0
56
0.99
54--95
19
2.2
20
91
4
68
40
0
0
59
0.97
1541--1602
32
1.9
32
93
0
106
27
0
17
54
1.43
2613--2869
49
5.2
48
81
7
259
36
15
25
22
1.94
2625--2870
98
2.5
98
83
0
312
36
16
26
21
1.94
3075--3368
96
3.1
96
83
2
360
35
16
25
23
1.95
3282--3708
228
1.9
227
88
2
642
33
16
25
24
1.96
3275--3711
114
3.8
114
84
1
565
33
16
26
23
1.95
6547--6590
20
2.2
19
84
15
54
47
9
11
31
1.71
7433--7535
23
4.5
22
81
4
100
38
27
22
11
1.89
7507--7577
23
3.1
23
91
4
117
43
22
25
8
1.81
7429--7577
46
3.3
44
77
11
149
41
24
23
10
1.86
9353--9500
46
3.2
46
90
0
197
31
8
18
40
1.82
9402--9470
22
3.0
22
62
22
52
36
10
17
36
1.84
9857--9887
16
1.9
16
93
0
53
41
3
25
29
1.71
12927--12962
14
2.5
15
91
8
58
30
0
5
63
1.17
16191--22870
291
22.9
290
84
4
8401
33
15
21
29
1.94
16191--22870
583
11.5
583
87
3
8608
33
15
21
29
1.94

Tables:   1

The End!