Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01004392.1 Kokia drynarioides strain JFW-HI SEQ_117768, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60205

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--336
78
4.3
77
84
1
350
23
19
32
24
1.97
1--340
39
8.7
39
76
3
281
23
19
32
24
1.97
12052--12094
21
2.3
19
84
15
54
69
2
6
20
1.23
12163--12472
30
10.4
29
75
7
194
36
1
23
37
1.65
12163--12392
29
7.8
29
76
9
126
38
1
23
36
1.65
12534--12834
162
1.8
164
81
5
378
47
11
18
22
1.80
13942--13989
6
8.2
6
77
13
55
52
2
0
45
1.12
16089--16375
51
5.6
51
86
1
360
29
23
14
32
1.94
19571--19677
19
5.8
18
72
18
69
52
4
1
41
1.33
19765--19803
20
2.0
20
90
5
62
41
0
5
53
1.23
26402--26474
21
3.5
22
74
7
62
35
24
12
27
1.91
34889--34918
16
1.9
16
93
6
53
13
20
6
60
1.55
37295--37404
40
2.8
39
88
1
166
26
16
28
29
1.97
46037--46114
39
2.0
39
100
0
156
23
17
7
51
1.71
50274--50329
23
2.5
24
77
19
66
39
12
10
37
1.78
55711--55742
8
4.0
8
100
0
64
37
0
12
50
1.41
59583--59629
16
3.0
15
84
9
58
12
10
0
76
1.02

Tables:   1

The End!