Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01004394.1 Kokia drynarioides strain JFW-HI SEQ_117770, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  207404

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30--73
14
3.1
14
76
3
52
18
0
11
70
1.16
152--224
27
2.7
27
91
0
119
19
31
31
17
1.95
4628--4658
16
2.0
15
93
6
53
51
6
6
35
1.53
11193--11249
28
2.0
28
86
0
78
28
1
17
52
1.54
15039--15105
34
2.0
34
93
0
116
34
10
13
41
1.79
18893--18960
33
2.1
33
100
0
136
35
11
20
32
1.89
24404--24433
8
3.8
8
90
0
51
63
13
10
13
1.52
38241--38302
30
2.1
30
84
6
81
50
12
4
32
1.62
44348--44638
145
2.0
144
93
2
474
35
7
13
43
1.73
44623--44656
15
2.2
16
89
5
52
32
0
0
67
0.91
70424--70692
132
2.0
132
97
0
511
47
6
3
42
1.46
73048--73134
6
14.5
6
98
0
129
56
0
43
0
0.99
92548--92591
21
2.1
21
91
0
70
79
0
15
4
0.89
99339--99394
17
3.3
16
76
16
51
16
3
21
58
1.52
99815--99844
6
5.0
6
100
0
60
0
16
0
83
0.65
107600--107672
32
2.4
30
77
11
78
53
0
5
41
1.24
113564--113592
12
2.3
13
94
5
51
27
0
10
62
1.28
117057--117105
21
2.3
20
80
10
53
44
2
14
38
1.56
136652--136697
22
2.1
23
84
15
62
17
19
17
45
1.85
151480--151521
14
3.0
14
83
13
59
64
4
0
30
1.14
151480--151523
13
3.2
13
78
12
52
63
4
0
31
1.14
154000--154034
18
2.0
18
88
5
54
51
2
0
45
1.16
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
159015--159073
22
2.6
23
83
2
75
44
22
18
15
1.87
159015--159078
23
2.9
22
83
2
74
45
20
18
15
1.86
159170--159217
24
1.9
26
84
16
66
31
22
0
45
1.53
164483--164529
21
2.1
21
84
7
58
36
4
2
57
1.30
181821--181854
16
2.1
16
94
0
59
67
5
0
26
1.13
183686--183731
23
2.0
23
100
0
92
8
8
21
60
1.53
187236--187266
2
15.5
2
100
0
62
48
0
0
51
1.00
191215--191288
23
3.3
22
70
19
55
56
1
4
37
1.27
194222--194255
16
2.1
16
94
0
59
52
0
0
47
1.00
200199--200245
6
7.3
6
78
21
51
4
17
0
78
0.90
200371--200426
27
2.1
26
86
3
76
51
0
1
46
1.11

Tables:   1

The End!