Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01004444.1 Kokia drynarioides strain JFW-HI SEQ_117845, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56732

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
487--535
16
3.1
15
74
8
53
63
4
6
26
1.36
1300--1365
23
2.9
24
88
4
93
39
18
12
30
1.87
1300--1388
23
3.8
24
83
4
85
40
19
12
28
1.87
1300--1388
47
1.9
46
84
6
117
40
19
12
28
1.87
1471--1517
12
4.0
12
80
2
51
44
14
12
27
1.82
9635--9668
11
3.3
11
84
16
54
32
0
0
67
0.91
27081--27152
34
2.1
34
92
5
119
65
11
5
18
1.43
32910--32978
30
2.3
30
85
2
86
46
8
10
34
1.69
34062--34112
24
2.1
24
92
0
84
56
11
5
25
1.57
38325--38349
13
1.9
13
100
0
50
84
0
16
0
0.63
41467--41501
18
2.0
17
94
5
61
57
0
0
42
0.99
45833--45898
35
1.9
34
84
9
89
54
0
7
37
1.29
45960--46006
17
2.8
17
76
20
53
55
2
2
40
1.24
54998--55237
41
5.9
41
83
0
300
28
20
29
21
1.98
55040--55113
24
3.4
23
66
24
61
31
22
32
13
1.93
55005--55237
123
1.9
123
86
0
331
28
19
29
22
1.98
56036--56100
31
2.1
31
94
0
112
36
18
6
38
1.76

Tables:   1

The End!